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Chemical Triphosphorylation of Oligonucleotides
Published on: June 2, 2022
在2'-5' lariat形成的 ribozyme 中RNA 催化作用的结构原理
Teresa Carlomagno1, Irene Amata, Luca Codutti
1Structural and Computational Biology Unit, EMBL, Meyerhofstraße 1, D-69117 Heidelberg, Germany. teresa.carlomagno@embl.de
Journal of the American Chemical Society
|March 12, 2013
概括
这项研究揭示了形成酸盐的 ribozyme 的结构,揭示了 RNA 催化过程中必不可少的关键相互作用. 这些发现揭示了RNA酶中分支部腺素识别的机制.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 结构生物学 结构生物学
背景情况:
- 通过RNA催化机制形成的形成在真核生物和原核生物中得到保护.
- 对于酸盐形成的 ribozymes 的结构性理解仍然有限.
- 这项研究的重点是人工的2'-5'AG1酸盐形成的 ribozyme.
研究的目的:
- 阐明RNA催化拉里亚特形成的结构基础.
- 为了研究酸盐形成的 ribozymes 的催化机制.
- 了解分支部位腺素的识别.
主要方法:
- 核磁共振 (NMR) 光谱法以确定非活性状态结构.
- 突变分析,分子建模和小角度X射线散射 (SAXS) 来建模活性状态.
- 生物物理技术探讨结构和功能方面.
主要成果:
- 不活跃的 ribozyme 结构揭示了在 5'- guanosine 的扩大主要沟和在一个伪节点顶部的循环外腺素 (A48).
- 活性状态模型表明,A48被与5'-瓜诺辛相邻的保存腺素识别.
- 一个由G1-N7协调的离子对于核友激活至关重要.
结论:
- 这些发现为RNA催化拉里亚特形成的机制提供了结构性的见解.
- 这项研究阐明了分支部位腺的识别机制.
- 这些见解对理解参与拉里亚形成的RNA酶有意义.
相关概念视频
Ribozymes
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
Ribozymes can be...
Ribozymes
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
Ribozymes can be...
RNA Structure
The basic structure of RNA consists of a string of ribonucleotides attached by phosphodiester bonds. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
RNA Structure
Overview
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
RNA Structure
Overview
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
Nucleic Acid Structure
The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms a 5′ to 3′ phosphodiester linkage.
DNA Structure
DNA has a double-helix structure. The...
DNA Structure
DNA has a double-helix structure. The...
