通过结合的DNA聚合酶释放染色体复制过程中扭曲的DNA的解决方案
Isabel Kurth1, Roxana E Georgescu, Mike E O'Donnell
1The Rockefeller University, Howard Hughes Medical Institute, 1230 York Avenue, New York, New York 10065, USA.
Nature
|March 29, 2013
概括
细菌DNA复制机 (replisome) 通过允许滞后链聚合酶经常脱离和重新连接来解决一个关键的拓问题. 这种动态的过程,独立于外部因素,确保DNA合成顺利进行,没有过度的超级卷.
科学领域:
- 分子生物学分子生物学
- 生物化学 生物化学
- 遗传学 是一个遗传学.
背景情况:
- DNA复制需要先导和滞后链聚合酶的协调行动.
- 结合复制由于DNA的螺旋结构而带来拓性挑战,导致超级卷积.
- 尽管面临这些挑战,但聚合酶保持连接的机制尚不清楚.
研究的目的:
- 为了研究大肠杆菌复原体的动态.
- 为了阐明DNA聚合酶如何在合复制过程中保持连接.
- 了解DNA合成过程中拓问题的解决方法.
主要方法:
- 组合生化分析. 组合生化分析.
- 单分子生物物理技术.单分子生物物理技术.
- 在大肠杆菌中复杂体动态的分析.
主要成果:
- 滞后链聚合酶在完成之前经常与Okazaki碎片分离,从而产生短暂的空隙.
- 这种"信号释放"是独立于原酶的,不需要蛋白质触发器.
- 滞后链聚合酶在复合体内表现出减少的过程性,在脱时被恢复.
结论:
- 反复体通过滞后链聚合酶的短暂解离来管理拓应力.
- 新合成的DNA中积累的超螺旋张力可能会降低滞后链聚合酶的过程性.
- 这种机制允许有效地进行DNA复制,而无需依赖拓酶来解决拓问题.
相关概念视频
DNA Topoisomerases
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. Type I...
Types and Mechanism of action
Topoisomerases are divided into two main types. Type I...
Homologous Recombination
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Translesion DNA Polymerases
Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The DNA Replication Fork
An organism’s genome needs to be duplicated in an efficient and error-free manner for its growth and survival. The replication fork is a Y-shaped active region where two strands of DNA are separated and replicated continuously. The coupling of DNA unzipping and complementary strand synthesis is a characteristic feature of a replication fork. Organisms with small circular DNA, such as E. coli, often have a single origin of replication; therefore, they have only two replication forks, one in...


