一个组素乙化开关通过SWR-C重塑酶调节H2A.Z沉积
Shinya Watanabe1, Marta Radman-Livaja, Oliver J Rando
1Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.
概括
基因素H3-K56乙化修改SWR-C酶活性,影响基因素变体交换. 这导致H2A.Z水平降低,揭示了染色质重塑和核细胞周转的新调节机制.
科学领域:
- 染色体生物学 染色体生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 分子遗传学 分子遗传学
背景情况:
- 基因组突变H2A.Z对于基因表达,DNA修复和中间体功能至关重要.
- 在核细胞中,SWR-C染色体重塑酶调节H2A.Z与正规H2A的交换.
研究的目的:
- 调查素H3素56乙化 (H3-K56Ac) 在调节SWR-C活性和H2A.Z核细胞占用中的作用.
- 阐明H3-K56Ac影响染色体重塑和基因组变异动态的机制.
主要方法:
- 生物化学试验以在体外评估SWR-C基质的特异性.
- 在酵母突变体中进行全基因组分析,以在不同的H3K56乙化状态下量化H2A.Z水平.
主要成果:
- 乙化H3-K56Ac改变SWR-C基质的特异性,促进乱交的二聚体交换 (H2A.Z或H2A).
- 在体内,H3K56的过乙化导致H2A.Z水平在全基因组范围内下降.
- 有证据表明,一个保存的SWR-C子单元作为"锁"来防止H2A.Z的去除.
结论:
- H3-K56Ac 是一个关键的组织蛋白修饰,它调节了染色质重塑反应.
- 这项研究为通过染色体调节器控制组质子变异和核细胞周转提供了新的见解.
相关概念视频
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Spreading of Chromatin Modifications
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Writers
The writer is an enzyme that can...
Nucleosome Remodeling
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Chromatin Modification in iPS Cells
Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Heterochromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...


