一种内在无序的蛋白质的动力学揭示了潜在的种子聚合的转移稳定构造
Qin Qiao1, Gregory R Bowman, Xuhui Huang
1Bioengineering Graduate Program, Division of Biomedical Engineering, ‡Department of Chemistry, §Center of Systems Biology and Human Health, School of Science and Institute for Advance Study, The Hong Kong University of Science and Technology , Clear Water Bay, Kowloon, Hong Kong.
Journal of the American Chemical Society
|September 12, 2013
概括
人类氨酸 (hIAPP) 聚合与II型糖尿病有关. 这项研究揭示了hIAPP单体的转移稳定状态,这对于理解聚合核和β细胞死亡至关重要.
科学领域:
- 生物物理学的生物物理.
- 计算生物学 计算生物学
- 分子动力学分子动力学
背景情况:
- 人类小岛粉样蛋白多 (hIAPP) 的粉样纤维沉积物与II型糖尿病有关.
- hIAPP聚合是一种用于β细胞亡的拟议机制,对胰岛素产生至关重要.
研究的目的:
- 为了阐明hIAPP单体的溶液结构和动态.
- 了解hIAPP聚合的核和随后的寡合体形成.
主要方法:
- 进行了广泛的分子动力学模拟.
- 马尔科夫状态模型是用来分析形态转换的.
主要成果:
- hIAPP单体表现出一种随机的线圈结构,没有占主导地位的折叠.
- 识别了许多超稳定形态状态,过渡时间范围从微秒到毫秒.
- 发现具有β-hairpin结构和暴露的疏水表面的特定状态是关键.
结论:
- 超稳定状态,特别是具有β-hairpin结构的状态,可能通过构造选择促进hIAPP聚合核化.
- 这些状态促进了疏水性相互作用,并为有序的β-链在纤维包装提供了一个模板.
相关概念视频
Intrinsically Disordered Proteins
Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
Intrinsically Disordered Proteins
Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
Protein Folding
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Folding
Overview
Molecular Chaperones and Protein Folding
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
Amyloid Fibrils
Amyloid fibrils are aggregates of misfolded proteins. Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils.
Amyloid deposits were observed as early as 1639 in the liver and the spleen. In 1854, Rudolph Virchow performed iodine staining, normally used to...
Amyloid deposits were observed as early as 1639 in the liver and the spleen. In 1854, Rudolph Virchow performed iodine staining, normally used to...


