探究基本基因中遗传重编码的极限
M J Lajoie1, S Kosuri, J A Mosberg
1Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.
概括
通过从大肠杆菌的基本基因中去除罕见的密码来彻底改变遗传密码是可行的. 然而,基因组设计的约束强调了快速原型设计和测试遗传密码修改的需要.
科学领域:
- 合成生物学 合成生物学
- 基因工程是一种基因工程.
- 微生物生物技术 微生物生物技术
背景情况:
- 彻底改变遗传密码使得工程生物具有新的化学能力和生物制.
- 以前的工作涉及重新分配UAG停止编码子,但由于它们在基因表达中的调节作用,修改流行感官编码子带来了更大的挑战.
研究的目的:
- 通过修改必要的基因来评估彻底改变遗传密码的可行性.
- 调查与全基因组密码子重新分配相关的挑战和限制.
主要方法:
- 在大肠杆菌中选择了42个高度表达的基本基因进行修改.
- 从这些选定的基因中删除了13个罕见的编码子的所有实例.
- 试图将所有剩余的编码子混合在80个工程E. coli菌株中.
主要成果:
- 证明了从必不可少的基因中删除全基因组13个特定编码的可行性.
- 确定了几种影响遗传密码改变过程的基因组设计约束.
结论:
- 全基因组的密码子去除是可以实现的,但需要仔细考虑设计限制.
- 强调了快速原型和代测试策略的必要性,用于工程复杂的基因修改.
相关概念视频
Gene Conversion
9.2K
Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...
9.2K
Exon Recombination
3.1K
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon...
Exon shuffling follows “splice frame rules.” Each exon...
3.1K
What is Genetic Engineering?
71.0K
Overview
71.0K
Conservative Site-specific Recombination and Phase Variation
5.7K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
5.7K
Reporter Genes
11.4K
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
11.4K
Genome Size and the Evolution of New Genes
7.6K
While every living organism has a genome of some kind (be it RNA, or DNA), there is considerable variation in the sizes of these blueprints. One major factor that impacts genome size is whether the organism is prokaryotic or eukaryotic. In prokaryotes, the genome contains little to no non-coding sequence, such that genes are tightly clustered in groups or operons sequentially along the chromosome. Conversely, the genes in eukaryotes are punctuated by long stretches of non-coding sequence.
7.6K


