鼠标基因调节域的相互作用图揭示了转录调节的基本原理
Kyong-Rim Kieffer-Kwon1, Zhonghui Tang2, Ewy Mathe1
1Genomics and Immunity, NIAMS, National Institutes of Health, Bethesda, MD 20892, USA.
Cell
|December 24, 2013
概括
哺乳动物细胞利用一个动态增强器景观,在发育过程中发生显著变化. 这项研究揭示了增强剂如何用于不同细胞类型的关键基因,控制组织特异性功能.
科学领域:
- 基因组学就是基因组学.
- 发展生物学 发展生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 增强剂在哺乳动物细胞中的使用在发育过程中发生变化.
- 这些增强剂变化的确切性质和程度尚未完全理解.
研究的目的:
- 在多能ES细胞和差异化B淋巴细胞中绘制促进剂-增强剂相互作用.
- 研究不同细胞类型的增强器景观的动态性质.
主要方法:
- 结合DNaseI过敏,ChIP-seq和ChIA-PET技术. 这种技术可以
- 利用高分辨率的CpG甲基组,基因组编辑和数字足迹.
主要成果:
- 已证实在各组织中增强剂使用的显著差异,即使对于广泛转录的基因,如Myc和Pim1.
- 证明增强剂与ES和B细胞中的不同组调节因子有关.
- 在开发过程中显示了增强剂活性,促进剂活性和血统决定因素招募之间的相关性.
结论:
- 有机体依赖于动态增强器环境,以对基本细胞功能进行组织特定的控制.
- 增强器重编程在细胞分化和发育中起着至关重要的作用.
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