在Drosophila中对零核酸递归拼接的全基因组识别
Michael O Duff1, Sara Olson1, Xintao Wei1
1Department of Genetics and Genome Sciences, Institute for Systems Genomics, University of Connecticut Health Center, Farmington, Connecticut 06030, USA.
Nature
|May 14, 2015
概括
递归拼接是一种去除大型内子的方法,在Drosophila中很常见,在人类中也会发生. 这项研究确定了Drosophila的197个新实例,揭示了内部去除的保存机制.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 基因表达 基因表达
背景情况:
- 递归拼接通过重新拼接在重新创建的5'拼接位 (拉切点) 来去除大型内子.
- 此前仅在少数Drosophila基因中确定,其患病率是未知的.
研究的目的:
- 为了研究复发性剪接在虫和人类的流行率和机制.
- 识别递归拼接的新型实例和保存特征.
主要方法:
- 分析来自多种多菌发育阶段,组织和细胞培养的总RNA测序数据.
- 在introns中识别零核酸exon杆点.
- 通过拉里亚特内部探测证实了顺序拼接.
- 功能性测试涉及U2AF耗尽.
- 在Drosophila物种中对拉切特点序列进行比较分析.
主要成果:
- 在115个Drosophila基因的130个内基因中确定了197个零核酸外基因杆点.
- 递归拼接被证实是构成过程,由U2AF枯竭抑制.
- 拉切点序列和功能在Drosophila中是进化保守的.
- 确定了四个递归拼接的人类基因,其中一个也在Drosophila中发现.
结论:
- 递归拼接是Drosophila.中引子去除的一个广泛的机制.
- 递归拼接也在人类中发生,这表明保留了生物作用.
- 这项研究为大型内子去除的机制提供了新的见解.
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