进化. 进化. 进化的. 酵母基因的系统化人性化揭示了保存的功能和遗传模块化
Aashiq H Kachroo1, Jon M Laurent1, Christopher M Yellman1
1Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
概括
基因的基本功能在数十亿年的进化过程中得到了保留. 人类基因可以取代酵母基因,表明在特定的生物途径中保持了保存的功能.
科学领域:
- 进化生物学是进化的生物学.
- 分子遗传学分子遗传学
- 基因组学就是基因组学.
背景情况:
- 了解在广的进化时间尺度上对基因功能保护的理解,对于破译进化原理至关重要.
- 研究深层进化分歧需要检查由显著的进化距离分隔的物种之间的基因的功能兼容性.
研究的目的:
- 为了确定基因是否在10亿年的进化过程中保留了祖先的功能.
- 通过评估功能性保护来确定支配深层进化分歧的原则.
- 探索人类基因在多大程度上可以功能性地取代必要的酵母基因.
主要方法:
- 取代了414个必需的酵母基因,用它们的人类正义基因.
- 在酵母基因丢失后对致命生长缺陷的补充进行了测试.
- 利用计算模拟来确认功能维护尽管序列分歧.
主要成果:
- 几乎一半 (47%) 的必要酵母基因可以被它们的人类正义基因功能性地替换.
- 基因可替代性不仅仅是通过序列相似性或表达水平来预测的.
- 可替代性强烈依赖于基因参与特定的生物模块或途径,例如固醇生物合成与DNA复制启动.
结论:
- 许多基本基因的关键祖先功能在10亿年的进化过程中得到保留.
- 功能性保护以特定途径的方式保持,证明对序列,拼接和蛋白质接口分歧的弹性.
- 针对特定生物功能的选择在保持基因可替代性在深层进化时间中起着关键作用.
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