广泛的共同翻译RNA衰变揭示了核糖体动力学
Vicent Pelechano1, Wu Wei2, Lars M Steinmetz3
1European Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.
Cell
|June 6, 2015
概括
传递 RNA (mRNA) 在翻译过程中被降解,这是一种影响大多数基因的保存过程. 这项研究揭示了协同翻译的mRNA衰变,并且在没有药物的情况下绘制了全基因组的核糖体动态图.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 生物化学 生物化学
背景情况:
- 以前假设活跃进行翻译的mRNAs被保护免受降解.
- 这种保护机制一直是基因表达调节的长期范例.
研究的目的:
- 为了研究mRNA在翻译过程中的命运.
- 为了确定mRNA降解是否与翻译同时发生 (共同翻译衰变).
- 开发一种用于全基因组测量核糖体动态的方法.
主要方法:
- 5'酸化mRNA降解中间体的测序.
- 通过共同翻译性衰变产生的核糖体足迹的全基因组分析.
- 评估RNase Rny1在压力诱导的核糖体暂停中的作用.
主要成果:
- 证明mRNAs被共同翻译性降解,这是继最后一个翻译核糖体之后的过程.
- 在正常和压力条件下,在翻译终结期间确定了全基因组的核糖体暂停部位.
- 发现了由氧化应激诱导的新型编码子特异性核糖体暂停位,依赖RNase Rny1.
结论:
- 同翻译mRNA衰变是一种广泛且保存的生物过程.
- 开发的方法提供了一个无药,体内方法来研究核糖体动力学和mRNA衰变.
- 核糖体暂停受压力和特定酶 (如RNase Rny1.1) 的调节.
相关概念视频
Nonsense-mediated mRNA Decay
12.2K
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
12.2K
Nonsense-mediated mRNA Decay
3.7K
3.7K
Nuclear Export of mRNA
9.3K
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
9.3K
Nuclear Export of mRNA
5.7K
5.7K
RNA Stability
36.4K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
36.4K
RNA Stability
12.2K
12.2K


