绘制核细胞分辨率 染色体折叠 在微C的酵母
Tsung-Han S Hsieh1, Assaf Weiner2, Bryan Lajoie3
1Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Cell
|June 30, 2015
概括
研究人员开发了Micro-C,这是一种高分辨率染色体折叠图的方法. 酵母基因组显示了新的自我关联域,揭示了对基因组紧缩和关键蛋白质在折叠中的作用的见解.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 染色体生物学 染色体生物学
背景情况:
- 了解基因组组织对于破译基因调节至关重要.
- 之前的染色体构造捕获技术缺乏核细胞水平的分辨率.
- 发芽的酵母基因组折叠模式在高分辨率下没有得到很好的特征.
研究的目的:
- 开发一种高分辨率的方法来绘制染色体折叠的地图.
- 为了研究发芽酵母的全基因组染色体组织.
- 为了确定参与酵母基因组紧缩的因素.
主要方法:
- 开发了Micro-C,一种基于Hi-C的技术,使用微球菌核酶进行染色质碎片化.
- 生成的核素分辨率染色体折叠地图用于芽酵母.
- 分析了Micro-C地图,以识别自我关联的域及其边界.
主要成果:
- 在酵母中确定了丰富的,短的自我关联域,与哺乳动物的拓关联域不同.
- 发现域边界在高转录基因和RSC-bound区域的促进者处得到丰富.
- 在酵母染色体折叠中确认了RSC,Ssu72,Mediator,Rtt109和H4尾巴的作用.
结论:
- 微-C提供了前所未有的细节的真核生物基因组结构.
- 酵母基因组折叠涉及由特定蛋白质调节的独特的域结构.
- 这些发现揭示了驱动染色体紧缩的分子机械.
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