四重复式转衣:四重复式-DNA双开关的阴离子依赖折叠和稳定性
Eric Largy1,2,3, Adrien Marchand1,2,3, Samir Amrane1,2,3
1U1212, ARNA Laboratory, Inserm , F-33000 Bordeaux, France.
Journal of the American Chemical Society
|February 4, 2016
概括
富含关氨酸的DNA序列形成四重复结构,可以在平行和反平行形式之间切换. 这种结构多态性高度依赖于阳离子度和类型,提供了新的应用.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 分子生物学分子生物学
背景情况:
- 富含关氨酸的序列形成四重复 (G4) 核酸,表现出显著的结构多态性.
- G4 DNA的稳定性和结构对阴离子类型和度敏感.
研究的目的:
- 为了研究 G 丰富 DNA 序列的阴子依赖结构多态性.
- 为了证明G4DNA作为由阴离子度控制的"双开关"系统的潜力.
主要方法:
- 利用光谱技术监测G丰富DNA序列的结构变化.
- 研究了不同 (K+), (Na+) 和 (Sr2+) 度对G4DNA构造的影响.
主要成果:
- 在富含的样本中观察到由低度的KCl触发的反平行到平行G4结构转换.
- 证明了第二个转换,涉及替代反平行G4结构转换为平行形式,并增加了阴离子度.
- 表明极低的K+或Sr2+度可以诱导G4的形成,这表明存在两个四层结构.
结论:
- 富G的DNA序列可以作为阴子控制的"双开关",因为它们的结构多态.
- 这些发现突出了G4DNA在纳米技术和DNA折叠的基本研究中的生物相关性和潜在应用.
相关概念视频
Single-Strand DNA Binding Proteins
17.2K
For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
17.2K
DNA Topoisomerases
37.4K
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
37.4K
DNA Helicases
24.9K
DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...
24.9K
Restarting Stalled Replication Forks
6.5K
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
6.5K
Protein Folding
130.4K
Overview
130.4K
Protein Folding
12.5K
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
12.5K


