相关实验视频
Updated: Mar 8, 2026

10:23
Glutamine Flux Imaging Using Genetically Encoded Sensors
Published on: July 31, 2014
10.1K
在LOV蛋白中引起长距离的化反应
Abir Ganguly1, Walter Thiel1, Brian R Crane2
1Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1 45470 Mülheim an der Ruhr, Germany.
Journal of the American Chemical Society
|February 2, 2017
概括
光氧电压 (LOV) 域使用光来触发蛋白质变化. 这项研究揭示了Vivid光受体蛋白中的特定Gln残留翻转如何传播光信号,从而实现二分化.
科学领域:
- 生物化学
- 分子生物学
- 光生物学
背景情况:
- 光氧电压 (LOV) 域是蓝光传感器.
- 它们在吸收光线时会发生形状变化,包括黄素辅因子的修饰.
- 假设一个不变的 Gln 残留在信号传播中的作用.
研究的目的:
- 调查 Gln 残留物侧链重定向在 LOV 域信号中的作用.
- 阐明 Vivid (VVD) 蛋白质中因光引起的形状变化的原子化机制.
- 提供对光感应器中的全信号传导的计算洞察力.
主要方法:
- 分子动力学 (MD) 模拟
- 复制交换分子动力学 (REMD) 模拟
- 自由能量模拟
主要成果:
- 模拟证实了 Gln182 胺在光诱导的形形成或黄素减少时的重定向 (翻转).
- 在光适应状态下,Gln翻转的能量障碍较低.
- Gln翻转被证明可以稳定一个链区域,破坏锁区的稳定,并促进VVD二元化.
结论:
- Gln182转换是LOV域信号转导的一个关键步骤.
- 这项研究为VVD的光诱导合提供了原子学解释.
- 计算结果与实验观察一致,验证了模型.
相关概念视频
Amino acids
108.8K
Amino acids are the monomers that comprise proteins. Each amino acid has the same fundamental structure, which consists of a central carbon atom, or the alpha (α) carbon, bonded to an amino group (NH2), a carboxyl group (COOH), and to a hydrogen atom. Every amino acid also has another atom or group of atoms bonded to the central atom known as the R group. There are 20 common amino acids present in proteins, each with a different R group. Variation in the amino acid sequence is responsible for...
108.8K
Ligand Binding and Linkage
5.8K
Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked. In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
5.8K
Allosteric Proteins-ATCase
6.8K
Binding sites linkages can regulate a protein's function. For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
6.8K
Ligand-Gated Ion Channel Receptor: Gating Mechanism
4.5K
Ligand-gated ion channels are transmembrane proteins that play a vital role in intercellular communication and functions of the nervous system. They allow the influx of ions across the membrane once the neurotransmitter binds, allowing the subsequent transmission of electrical excitation across the neurons. Other ligand-gated ion channels, like the γ-aminobutyric acid (GABA) receptor, permit anions like chloride into the cells on the binding of the GABA molecule. Their entry into the cell...
4.5K
Cooperative Allosteric Transitions
2.8K
2.8K
Cooperative Allosteric Transitions
9.2K
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
9.2K

