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伪结形成种子 旋转子 ribozyme 分裂反应 坐标
Nikola Vušurović1, Roger B Altman2, Daniel S Terry2
1Institute of Organic Chemistry and Center for Molecular Biosciences, University of Innsbruck , 6020 Innsbruck, Austria.
Journal of the American Chemical Society
|June 10, 2017
概括
扭曲RNA的折叠动态揭示了其催化活性的一个关键步骤. 中央伪结必须正确地打开和关闭,以便有效地切割RNA.
科学领域:
- 分子生物学
- 生物化学
- 结构生物学
背景情况:
- 双核酶是一种在细菌和真核生物中发现的核分解酶.
- 它的生物功能尚未完全理解,但其催化机制的部分特征.
- 了解旋转RNA的动态折叠是阐明其功能的关键.
研究的目的:
- 在分裂反应期间研究旋转RNA的动态折叠方面.
- 探索RNA折叠,伪结形成和催化活动之间的关系.
- 了解旋转 ribozyme 的低周转效率的结构基础.
主要方法:
- 使用大量和单分子光共振能量转移 (smFRET) 技术.
- 采用战略标记的旋转RNA结构来监测折叠动态.
- 通过注射离子 (Mg2+) 进行了前平稳状态三色smFRET实验.
主要成果:
- 在生理Mg2+度下,旋转RNA的中央伪结 (T1) 呈现可逆的开闭动态.
- 在使用smFRET之前形成T1的不合折叠.
- 证明正确的基质定向和T1闭合是裂变适合的形状的必要条件.
- 观察到,分裂的3'-片段保持了紧的伪结,解释了 ribozyme 的低周转率.
结论:
- 旋转RNA折叠是一种动态过程,涉及可逆的伪结的打开/关闭.
- 特定的折叠路径,包括P1结构之前的T1闭合,对于催化能力至关重要.
- 分裂碎片的稳定折叠有助于旋转核糖酶的低效率.
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