相关实验视频
Updated: May 8, 2026

09:12
DNAzyme-dependent Analysis of rRNA 2’-O-Methylation
Published on: September 16, 2019
表观基因DNA修饰 N6 - 甲基因导致局部特异性RNA聚合酶II转录暂停
1Department of Chemistry, Sun Yat-Sen University , Guangzhou 510275, China.
Journal of the American Chemical Society
|September 22, 2017
概括
在DNA中的N6-甲基氨酸 (N6-mA) 导致RNA聚合酶II (polII) 在转录过程中暂停. 这种表观遗传标记使基因配对不稳定,降低了RNA的整合效率,并促进了DNA的回溯.
科学领域:
- 表观遗传学
- 分子生物学
- 基因组学
背景情况:
- N6-甲基氨酸 (N6-mA) 是一种在真核生物中的表观基因DNA修饰.
- 与5-甲基细胞素不同,N6-mA在基因调节中的功能作用尚不清楚.
- N6- mA对RNA聚合酶II (pol II) 转录延长的影响尚不清楚.
研究的目的:
- 研究pol II识别和处理N6-mA位点的分子机制.
- 确定N6-mA如何影响pol II转录延长动态.
- 提供N6-mA在真核基因组中的功能后果的见解.
主要方法:
- 使用了Saccharomyces cerevisiae pol II转录延长系统.
- 采用生物化学方法来研究pol II-N6-mA的相互作用.
- 进行结构分析以阐明分子层面的机制.
主要成果:
- N6-mA诱导了特定地点的pol II暂停和停滞.
- 结构分析显示,N6-mA可以占据+1模板位置,但会损害UTP的基配稳定性.
- 腺因上的6甲基降低了RNA的整合效率,并促进了回溯转位.
结论:
- 在转录延长过程中,N6-mA作为pol II暂停的信号.
- 表观遗传修饰会影响核酸的结合和DNA模板的转移.
- 这些发现为N6-mA在真核转录中的功能性作用提供了分子洞察力.
相关概念视频
Mismatch Repair
Overview
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
RNA Editing
RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Mismatch Repair
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...

