创新的散射分析表明,疏水性无序蛋白在水中扩大
Joshua A Riback1, Micayla A Bowman2, Adam M Zmyslowski3
1Graduate Program in Biophysical Sciences, University of Chicago, Chicago, IL 60637, USA.
概括
本质上有障碍的蛋白质 (IDP) 很难研究. 一种使用小角度X射线散射的新方法显示IDP在水中保持扩展,这表明它可以防止错误折叠.
科学领域:
- 生物物理
- 结构生物学
- 蛋白质科学
背景情况:
- 很大一部分蛋白质本质上是无序的 (IDP) 或采用非原生状态.
- 由于有限的物理模型和复杂的实验数据,研究IDP很困难.
- 了解蛋白质的结构灵活性对于生物过程至关重要.
研究的目的:
- 开发一种用于表征内在无序蛋白质尺寸和溶剂相互作用的一般方法.
- 在水溶液中研究IDP的结构性行为.
- 挑战现有的关于蛋白质崩在水中的假设.
主要方法:
- 使用一个小角度X射线散射 (SAXS) 测量.
- 从SAXS数据中提取物理参数的新分析程序.
- 这种方法适用于各种内在无序的蛋白质.
主要成果:
- 从SAXS数据中成功提取了IDP的尺寸和溶剂质量 (自身相互作用).
- 证明了具有低净电荷和高疏水性的IDP在水中保持高度扩张.
- 在水性环境中对类似蛋白质的序列的崩的预期相反.
结论:
- 大多数可折叠序列的展开状态很可能是扩展的.
- 溶液中的蛋白质扩张可能是防止错误折叠和聚合的进化机制.
- 开发的基于SAXS的方法为IDP表征提供了强大的工具.
更多相关视频
11:27Studying Soft-matter and Biological Systems over a Wide Length-scale from Nanometer and Micrometer Sizes at the Small-angle Neutron Diffractometer KWS-2
Published on: December 8, 2016
12.8K
09:48In Situ Characterization of Hydrated Proteins in Water by SALVI and ToF-SIMS
Published on: February 15, 2016
8.9K
相关概念视频
Intrinsically Disordered Proteins
20.0K
Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
20.0K
Intrinsically Disordered Proteins
2.9K
2.9K
Protein Folding
128.6K
Overview
128.6K
Protein Folding
11.7K
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
11.7K
Entropy and Solvation
8.6K
The process of surrounding a solute with solvent is called solvation. It involves evenly distributing the solute within the solvent. The rule of thumb for determining a solvent for a given compound is that like dissolves like. A good solvent has molecular characteristics similar to those of the compound to be dissolved. For example, polar solutions dissolve polar solutes, and apolar solvents dissolve apolar solutes. A polar solvent is a solvent that has a high dielectric constant (ϵ...
8.6K
Molecular Chaperones and Protein Folding
20.0K
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
20.0K
