一个机器驱动的寻找阿佐光异构的全球反应坐标
Pedram Tavadze1, Guillermo Avendaño Franco1, Pengju Ren2,3
1Department of Physics and Astronomy, West Virginia University , Morgantown, West Virginia 26506-6315, United States.
Journal of the American Chemical Society
|December 14, 2017
概括
阿佐的光异构化是由中央的C-NN-C二面角驱动的. 全球反应坐标显示反转辅助旋转也对这种光激活的机械转换有显著的贡献.
科学领域:
- 摄影化学
- 分子力学
- 有机化学
背景情况:
- 阿佐是通过光异构化研究光诱导的机械变化的关键染色体.
- 传统上,C-NN-C二面角被认为是亚博子 cis-trans 异构的主要反应坐标.
研究的目的:
- 开发和分析一个包括所有内部坐标的全球反应坐标,用于阿佐光异构化.
- 量化每个内部坐标对整体光异构化机制的贡献.
- 绘制跨 cis 能源配置中的关键内部坐标的变化.
主要方法:
- 计算分析定义一个全球反应坐标.
- 个别内部坐标贡献的量化.
- 在光异构化过程中的内部坐标动态的能量概况映射.
主要成果:
- 中央的C-NN-C二面角仍然是阿佐光异构反应坐标中的主要因素.
- 由四个相邻的二面角 (C-C-NN) 驱动的反转辅助旋转对整体机制有显著的贡献 (约为50%).
- 在反向辅助旋转过程中,在相邻的C-C-N角度观察到最小的变化.
结论:
- 亚烯光异构化涉及到中心二面角之外的内部坐标的复杂相互作用.
- 逆转辅助旋转是阿佐光异构化机制的关键组成部分,尽管此前被低估了.
- 了解这些详细的坐标动力学可以更深入地了解光激活的分子转换.
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