在兰巴结合性重组过程中,附着部位的突触包括通过蛋白质-DNA复合体捕获裸体DNA
E Richet1, P Abcarian, H A Nash
1Laboratory of Molecular Biology National Institute of Mental Health Bethesda, Maryland 20892.
Cell
|January 15, 1988
概括
细菌附着部位 (attB) 通过与病毒内体的碰撞获得Int复合酶,而不是直接结合. 在兰巴达集成过程中这种DNA捕获是蛋白质驱动的,而不是取决于同质性.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 病毒学 病毒学
背景情况:
- 菌体的lambda集成需要Int重组酶来结合和分裂病毒 (attP) 和宿主 (attB) DNA附着部位.
- 通过attB DNA获得Int重组酶进行整合的确切机制尚不清楚.
研究的目的:
- 阐明在兰巴集成过程中attB位点对Int重组酶的获取机制.
- 研究DNA同质性和蛋白质-DNA相互作用在attB-attP突触中的作用.
主要方法:
- 用DNA足迹测试来评估Int-DNA结合.
- 一种新型的DNA裂变试验,用于监测重组动态.
- 在有竞争DNA的情况下分析attB-attP相互作用.
主要成果:
- 细菌的attB部位在有竞争DNA的情况下无法稳定地结合Int复合酶.
- attB通过与intasome的碰撞获得Int重组酶,intasome是在attP位点上形成的复合体.
- 通过attP intasome捕获attB独立于DNA同质性,由蛋白质相互作用驱动.
结论:
- 兰巴达集成涉及一种新的机制,即attB通过蛋白质介导相互作用被attP intasome捕获.
- attB和attP之间的突触是由蛋白质-DNA和蛋白质-蛋白质相互作用控制的,而不是DNA序列同质.
- 这一发现澄清了特定地点重组和核蛋白组合形成的动态.
相关概念视频
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
Homologous Recombination
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Conservative Site-specific Recombination and Phase Variation
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
Single-Strand DNA Binding Proteins
For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
Activation of Integrins
Integrins bind ligands and transmit information from outside the cell to inside or vice-versa through an "outside-in signaling" or "inside-out signaling."
In "outside-in signaling," external factors in the extracellular space bind to exposed ligand binding sites on integrins. This causes the inactive protein to undergo a conformational change to become active. Integrins are often clustered on the cell membrane. Repetitive and regularly spaced ligand binding events provide an effective stimulus.
In "outside-in signaling," external factors in the extracellular space bind to exposed ligand binding sites on integrins. This causes the inactive protein to undergo a conformational change to become active. Integrins are often clustered on the cell membrane. Repetitive and regularly spaced ligand binding events provide an effective stimulus.


