在溶液中形成β-转折的普罗林和水稳定两步折叠机制
Nicola Steinke1, Anna Genina2, Richard J Gillams1
1Department of Biochemistry , University of Oxford , Oxford OX1 3QU , U.K.
Journal of the American Chemical Society
|May 29, 2018
概括
蛋白质折叠是由水分子在两步过程中吸引特定的骨位所驱动的. 这种特定位置的水分,特别是用proline,稳定折叠状态并促进β转.
科学领域:
- 生物物理
- 结构生物学
- 计算化学
背景情况:
- 在水溶液中蛋白质折叠机制尚不完全理解.
- 水分子在驱动蛋白质折叠中的确切作用是有争议的.
- 了解蛋白质折叠对于分子生物学和药物开发至关重要.
研究的目的:
- 阐明蛋白质折叠的原子尺度机制,特别是β转折的形成.
- 调查中心侧链残留物对折叠的影响.
- 确定水蛋白相互作用在稳定折叠中间体中的作用.
主要方法:
- 使用中子和X射线衍射的组合来获得原子级结构信息.
- 使用先进的计算机模拟来模拟的行为.
- 分析了一系列具有不同中心残留量的KGXGK (X = P,G,S,L).
主要成果:
- 确定KGXGK中的β转形成是通过两步的,由骨干部位之间的水驱动的吸引力发生的.
- 在早期折叠阶段确定了骨的特定位点水分作为关键促进剂.
- 观察到,在i+1位置上的proline增强了折叠和中间状态的稳定性.
结论:
- 提出了一种特定位置的骨干水化引发蛋白质折叠的机制.
- 结论是水与蛋白的相互作用,特别是与蛋白的相互作用,对于稳定结构至关重要.
- 建议这些发现解释了蛋白质内β转中含有proline的序列的较高流行率.
相关概念视频
Solution Formation
38.0K
There is no one solvent that can dissolve every type of solute. Some substances that readily dissolve in a certain solvent might be insoluble in a different solvent. A simple way to predict which substances dissolve in which solvent is the phrase "like dissolves like". This means that polar substances, such as salt and sugar, dissolve in a polar substance like water. In contrast, non-polar substances are more soluble in non-polar solvents such as carbon tetrachloride.
This selective...
This selective...
38.0K
Energetics of Solution Formation
7.4K
The formation of a solution is an example of a spontaneous process, which is a process that occurs under specified conditions without energy from some external source.
When the strengths of the intermolecular forces of attraction between solute and solvent species in a solution are no different than those present in the separated components, the solution is formed with no accompanying energy change. Formation of the solution requires the solute–solute and solvent–solvent...
When the strengths of the intermolecular forces of attraction between solute and solvent species in a solution are no different than those present in the separated components, the solution is formed with no accompanying energy change. Formation of the solution requires the solute–solute and solvent–solvent...
7.4K
Protein Folding
128.1K
Overview
128.1K
Mechanism of Lamellipodia Formation
3.7K
Cells migrating in response to external stimuli form lamellipodia, which are thin membrane protrusions supported by a mesh of linked, branched, or unbranched actin filaments. These actin filaments interact with myosin motor proteins, creating the dynamic actomyosin complex within the cytoskeleton. Contractility, or the ability to generate contractile stress, is inherent to the actomyosin complex. It helps cells detect the stiffness of the surrounding ECM and exert contractile force for...
3.7K
Mechanism of Filopodia Formation
3.2K
Filopodia are thin, actin-rich cellular protrusions that play an important role in many fundamental cellular functions. They vary in their occurrence, length, and positioning in different cell types, suggesting their diverse roles.
Their main function is to guide migrating cells during normal tissue morphogenesis or cancer metastasis by recognizing and making initial contacts with the extracellular matrix. However, they can also act as stationary cell anchors or help to establish communication...
Their main function is to guide migrating cells during normal tissue morphogenesis or cancer metastasis by recognizing and making initial contacts with the extracellular matrix. However, they can also act as stationary cell anchors or help to establish communication...
3.2K
Aldehydes and Ketones with Water: Hydrate Formation
4.9K
An oxygen-based nucleophile, like water, can undergo addition reactions with aldehydes and ketones. The reaction leads to the formation of hydrates, also referred to as 1,1-diols or geminal diols.
The formation of hydrates is a reversible reaction. Hydrate formation is influenced by steric and electronic factors accompanying the alkyl substituents on the carbonyl group: The rate of hydrate formation increases with a decrease in the number of alkyl groups attached to the carbonyl carbon. Hence,...
The formation of hydrates is a reversible reaction. Hydrate formation is influenced by steric and electronic factors accompanying the alkyl substituents on the carbonyl group: The rate of hydrate formation increases with a decrease in the number of alkyl groups attached to the carbonyl carbon. Hence,...
4.9K


