全球表层土壤微生物组的结构和功能
Mohammad Bahram1,2,3, Falk Hildebrand4, Sofia K Forslund4,5,6
1Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia. bahram@ut.ee.
Nature
|August 3, 2018
概括
细菌的遗传多样性在温带土壤中达到顶峰,而微生物的基因组成则受到环境因素的影响,而不是地理因素. 生物相互作用,如细菌-真菌对抗,也塑造了这些土壤群体.
科学领域:
- 微生物学
- 生态学
- 环境科学
背景情况:
- 土壤拥有地球上最多样化的微生物, 对于营养循环和碳储存至关重要.
- 了解土壤微生物群落 (细菌和真菌) 需要对它们的全球分布,基因库和环境关系进行建模.
- 微生物多样性和功能的全球模式对于预测生态系统服务至关重要.
研究的目的:
- 模拟全球分布模式和土壤微生物的功能基因库.
- 研究塑造土壤细菌和真菌群落的生物和环境关联.
- 了解表层土壤微生物多样性和基因组成的驱动因素.
主要方法:
- 在189个地点 (7,560个子样本) 的全球表土样本上利用了元基因组学和元基因编码.
- 分析了细菌和真菌的遗传多样性和基因组成.
- 评估微生物群落,环境变量和地理距离之间的关系.
主要成果:
- 细菌的遗传多样性在温带息地是最高的;真菌的多样性模式不同.
- 微生物的基因组成更多地与环境变量 (降水,土壤pH) 相比,不同于地理距离.
- 从抗生素耐药基因推断出强烈的细菌-真菌对抗性的证据表明有显著的生物相互作用.
结论:
- 菌类和细菌表现出全球的利基差异化,对环境因素有截然不同的反应.
- 环境过和竞争显著影响微生物的丰富性,组成和基因功能.
- 土壤微生物对全球营养循环的贡献在空间上有所不同,受到环境和生物因素的影响.
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