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相关概念视频

CRISPR01:59

CRISPR

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Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
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CRISPR and crRNAs02:53

CRISPR and crRNAs

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Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
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Single-pass Transmembrane Proteins01:25

Single-pass Transmembrane Proteins

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Integral membrane proteins are tightly associated with the cell membrane and play a crucial role in cell communication, signaling, adhesion, and transport of the molecules. Some integral membrane proteins are present only in the membrane monolayer. For example, the enzyme fatty acid amide hydrolase is present in the cytoplasmic side of the membrane monolayer. In contrast, another type of integral membrane protein, also known as a transmembrane protein, spans across the membrane. Transmembrane...
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Dimensional Analysis03:40

Dimensional Analysis

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Dimensional analysis, also known as the factor label method, is a versatile approach for mathematical operations. The main principle behind this approach is: the units of quantities must be subjected to the same mathematical operations as their associated numbers. This method can be applied to computations ranging from simple unit conversions to more complex and multi-step calculations involving several different quantities and their units.
Conversion Factors and Dimensional Analysis
The unit...
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Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

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For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
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Protein and Protein Structure02:15

Protein and Protein Structure

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Proteins are one of the most abundant organic molecules in living systems and have the most diverse range of functions of all macromolecules. Proteins may be structural, regulatory, contractile, or protective. They may serve in transport, storage, or membranes; or they may be toxins or enzymes. Their structures, like their functions, vary greatly. They are all, however, amino acid polymers arranged in a linear sequence.
A protein's shape is critical to its function. For example, an enzyme...
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相关实验视频

Updated: Feb 3, 2026

BEST: Barcode Enabled Sequencing of Tetrads
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BEST: Barcode Enabled Sequencing of Tetrads

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蛋白质条形码可以实现高维单细胞CRISPR屏幕

Aleksandra Wroblewska1, Maxime Dhainaut1, Benjamin Ben-Zvi2

  • 1Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

Cell
|October 23, 2018
PubMed
概括

研究人员开发了一种新的蛋白质条码系统 (Pro-Codes),以克服CRISPR基因功能查的局限性. 这项技术允许高维,单细胞表型,揭示了癌细胞免疫编辑和基因调节的新见解.

关键词:
关于CRISPR的研究一个T细胞癌症功能性基因组学干扰素马途径质量细胞测量聚合屏幕蛋白质条形码单细胞分析瘤免疫学

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Competitive Genomic Screens of Barcoded Yeast Libraries
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Competitive Genomic Screens of Barcoded Yeast Libraries

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Genetic Barcoding with Fluorescent Proteins for Multiplexed Applications
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Genetic Barcoding with Fluorescent Proteins for Multiplexed Applications

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相关实验视频

Last Updated: Feb 3, 2026

BEST: Barcode Enabled Sequencing of Tetrads
12:59

BEST: Barcode Enabled Sequencing of Tetrads

Published on: May 1, 2014

10.6K
Competitive Genomic Screens of Barcoded Yeast Libraries
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Competitive Genomic Screens of Barcoded Yeast Libraries

Published on: August 11, 2011

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Genetic Barcoding with Fluorescent Proteins for Multiplexed Applications
13:14

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科学领域:

  • 分子生物学
  • 免疫学
  • 生物技术

背景情况:

  • CRISPR 屏对于发现基因功能至关重要,但由于DNA 条形码的分辨率受到限制.
  • 目前基于DNA的方法限制了表型能力,缺乏单细胞分辨率.

研究的目的:

  • 开发一个蛋白质级条码系统 (Pro-Codes) 以加强CRISPR选.
  • 为更广泛的功能基因组应用提供高维,单细胞表型.

主要方法:

  • 合成的蛋白质条形码 (Pro-Codes) 使用线性表位的三重组合.
  • 将Pro-Code载体引入细胞,并使用14个抗体的CyTOF质细胞计分析.
  • 与CRISPR配对的Pro-Codes用于同时分析淘汰细胞中的表型标记,包括光信号.

主要成果:

  • 产生了超过100个独特的Pro-Code并检测到364个群体,创建了最大的蛋白质报告器集.
  • 确定Psmb8和Rtp4对于癌细胞的抗原依赖性免疫编辑至关重要.
  • 发现Socs1是编程死亡基1 (Pd-l1) 的负调节剂.

结论:

  • Pro-Code技术使得在单细胞分辨率下,数百个基因的高维蛋白级同步表型化成为前所未有的.
  • 这种进步显著扩大了功能基因组学和药物发现研究的能力.