在酶进化中平衡特异性和混杂性:性酸酶超级家族中的多维活动过渡
Bert van Loo1, Christopher D Bayer1, Gerhard Fischer1
1Department of Biochemistry , University of Cambridge , Cambridge CB2 1GA , United Kingdom.
Journal of the American Chemical Society
|December 1, 2018
概括
酶的无序性,即酶催化多种反应的能力,促进了功能进化. 这项研究揭示了性酸酶超级家族酶如何在不失去现有功能的情况下进化新功能,从而提供了进化途径的见解.
科学领域:
- 生物化学
- 进化生物学
- 结构生物学
背景情况:
- 具有高催化能力和无序性的酶对于功能进化至关重要,使其能够在没有功能损失的情况下适应.
- 性酸酶 (AP) 超级家族为研究酶进化提供了一个模型,因为它具有多样化的成员和催化能力.
研究的目的:
- 系统地追踪AP超级家族中的杂交酶的特异性和反应性的演变.
- 通过对结构,序列和基质特异性的比较分析,研究酸硫酸酶 (ASs) 和酸单水溶酶 (PMHs) 之间的过渡区.
主要方法:
- 蛋白序列的遗传学分析以绘制进化关系.
- 动态分析以表征酶活动和速率加速.
- 结晶学以了解酶结构和基质相互作用.
主要成果:
- 所有特征化的酶都表现出四种不同的和硫酶活性,主要反应和杂交反应的速度都显著加快.
- 发现了一种新型的AS类,与已知的PMH非常相似,表明了以前未知的功能差异.
- 过渡期酶的分析揭示了功能进化和活动之间的权衡模式.
结论:
- 在AP超级家族中, 催化性乱交是普遍存在的,
- 在新的AS中以不变的基质特异性为例,允许在没有初始功能损失的情况下进化.
- 这种进化机制提供了一个解决方案,以避免在新酶功能出现时发生适应性冲突.
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