对也门2016-2017年霍乱流行病的基因分析
François-Xavier Weill1, Daryl Domman2,3, Elisabeth Njamkepo4
1Institut Pasteur, Unité des Bactéries Pathogènes Entériques, Paris, France. francois-xavier.weill@pasteur.fr.
Nature
|January 4, 2019
概括
在也门,最大的霍乱疫情源于第七次大流行V. cholerae O1 El Tor (7PET) 的单一南亚血统. 越南
科学领域:
- 微生物学
- 基因组学
- 流行病学
背景情况:
- 自2016年9月以来,也门正在经历历历史上最大的霍乱疫情,
- 疫情发生在两个不同的浪潮中,第二次浪潮始于2017年4月,涉嫌病例超过100万例.
研究的目的:
- 研究来自也门疫情的Vibrio cholerae分离体的遗传学关系,病变和抗菌耐药性决定因素.
- 将也门疫情分离物置于第七次大流行V. cholerae O1 El Tor (7PET) 血统的全球背景下.
主要方法:
- 来自也门和邻近地区的116种Vibrio cholerae的全基因组测序.
- 这些序列的遗传学分析与全球1,087种第七次大流行V. choleraeO1和O139生物型El Tor分离物.
主要成果:
- 也门疫情分离物属于7PET血统的一个亚系,特别是V. cholerae血清型Ogawa.
- 这种亚系起源于南亚,在东非爆发,随后蔓延到也门.
- 叶门分离物对常用的霍乱治疗方法和多素B具有敏感性.
结论:
- 也门霍乱疫情与7PET血统的特定亚洲亚系有关.
- 基因组监测对于了解大流行霍乱的全球传播和演变至关重要.
- 也门分离物对关键抗生素的敏感性表明有有效的治疗选择.
相关概念视频
Genomics
40.6K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
40.6K
Genomic Imprinting and Inheritance
37.2K
Diploid organisms inherit genetic material through chromosomes from both parents. Copies of the same gene are known as alleles. In most cases, both alleles are simultaneously expressed and allow various cellular processes to function optimally. If one of the alleles is missing or mutated, the expression of the other allele can compensate; however, this is not true for all genes.
The expression of some genes depends on which parent passed the gene to the offspring, through a phenomenon known as...
The expression of some genes depends on which parent passed the gene to the offspring, through a phenomenon known as...
37.2K
Genome Size and the Evolution of New Genes
9.1K
While every living organism has a genome of some kind (be it RNA, or DNA), there is considerable variation in the sizes of these blueprints. One major factor that impacts genome size is whether the organism is prokaryotic or eukaryotic. In prokaryotes, the genome contains little to no non-coding sequence, such that genes are tightly clustered in groups or operons sequentially along the chromosome. Conversely, the genes in eukaryotes are punctuated by long stretches of non-coding sequence.
9.1K
Genome Size and the Evolution of New Genes
3.4K
3.4K
Comparing Mitochondrial, Chloroplast, and Prokaryotic Genomes
16.0K
The present-day mitochondrial and chloroplast genomes have retained some of the characteristics of their ancestral prokaryotes and also have acquired new attributes during their evolution within eukaryotic cells. Like prokaryotic genomes, mitochondrial and chloroplast genomes neither bind with histone-like proteins nor show complex packaging into chromosome-like structures, as observed in eukaryotes. Unlike mitotic cell divisions observed in eukaryotic cells, mitochondria and chloroplasts...
16.0K
Genomic DNA in Prokaryotes
48.6K
The genome of most prokaryotic organisms consists of double-stranded DNA organized into one circular chromosome in a region of cytoplasm called the nucleoid. The chromosome is tightly wound, or supercoiled, for efficient storage. Prokaryotes also contain other circular pieces of DNA called plasmids. These plasmids are smaller than the chromosome and often carry genes that confer adaptive functions, such as antibiotic resistance.
Genomic Diversity in Bacteria
Although bacterial genomes are much...
Genomic Diversity in Bacteria
Although bacterial genomes are much...
48.6K


