细胞中的蛋白质-蛋白质相互作用的光近度分析
Journal of the American Chemical Society
|December 11, 2019
概括
我们开发了一种新的光近距离蛋白相互作用 (PhotoPPI) 方法来绘制细胞中的蛋白相互作用. 这项技术跟踪动态蛋白质网络,揭示了KEAP1相互作用在细胞压力下如何变化.
科学领域:
- 生物化学
- 细胞生物学
- 化学生物学
背景情况:
- 绘制蛋白与蛋白相互作用 (PPI) 对于理解细胞机制至关重要.
- 现有的方法往往缺乏时间分辨率或在活细胞中分析相互作用的能力.
- 像KEAP1这样的反氧敏感蛋白在细胞信号和应激反应中起着关键作用,但它们的动态相互作用网络尚未完全理解.
研究的目的:
- 引入一种新的光近距离蛋白相互作用 (PhotoPPI) 分析方法.
- 为了使PPI在体外和活细胞中具有高时间分辨率的映射.
- 在活细胞中研究氧化还原调节感应蛋白KEAP1的动态相互作用网络.
主要方法:
- 针对蛋白质标记的生物对角,多功能化学探针的开发.
- 使用SNAP-Tag/甲共价相互作用进行探针准.
- 使用光激活探针 (PP1) 释放碳核爱好者进行近距离标记.
- 与定量液体染色体-双重质谱 (LC-MS/MS) 进行整合,以实现无偏的相互作用映射.
主要成果:
- 在实验室中证明了易于探测和相互作用和光依赖的标记.
- 在活细胞中成功地绘制了KEAP1相互作用,在基底条件下确定了已知的和新的结合伙伴,如PGAM5和HK2.
- 在代谢或氧化还原应激下发现KEAP1相互作用的显著变化,包括与溶酶体贩运蛋白 (例如SQSTM1,CTSD,LGMN) 的关联.
结论:
- 照片PPI是一种强大的新方法,用于绘制活细胞中的动态蛋白质相互作用.
- 这项研究为KEAP1的动态相互作用网络提供了前所未有的洞察力,
- 通过 PhotoPPI,可以追踪高时间分辨率的氧化还原敏感蛋白质的"社交网络".
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