介电环境对同位素的影响 糖化物异解:计算评估和原子赫西安分析
Katarzyna Świderek1,2, Alexander J Porter2, Catherine M Upfold2
1Departament de Química Física i Analítica , Universitat Jaume I , 12071 Castellón , Spain.
同位素效应对溶剂极性敏感,隐式和显式溶解模型提供了洞察力. 一个小块的赫西安矩阵捕获溶剂
科学领域:
- 计算化学
- 物理化学
- 化学物理
背景情况:
- 同位素效应受周围介质的极性影响.
- 隐性溶剂模型可以预测平衡同位素效应 (EIEs),但可能显示不一致.
- 模拟酶反应需要明确考虑蛋白质环境.
研究的目的:
- 使用计算方法研究EIE对溶剂极性的敏感性.
- 为了比较隐式和显式解决模型来预测EIE.
- 使用原子赫西分析分析溶剂对EIEs的贡献.
主要方法:
- 使用分子形腔的隐性溶剂计算 (PCM方法).
- 显式解决计算与配置 (QM/MM) 的平均值.
- 使用B3LYP/6-31+G(d) 和OPLS-AA的力场.
- 原子黑森分析以确定对EIEs的关键贡献.
主要成果:
- 异质溶解的EIEs对210的相对电容度非常敏感.
- 不同的PCM实施可能会产生矛盾的趋势.
- 原子赫西安分析显示,3x3块捕捉了溶剂对EIEs的影响,包括隐式和显式溶解.
- 显式溶解证实了阴子转移隐式模型的预测.
结论:
- 溶剂的极性对同位素的影响很大.
- 谨慎实施和解释计算模型至关重要.
- 一个简单的黑森区块实际上代表了EIE的溶剂效应.
- QM/MM模拟对于解释溶液和酶反应中的同位素效应是有价值的.
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