纵向多组学揭示了刺激性肠综合征的特定子组机制
Ruben A T Mars1, Yi Yang2, Tonya Ward3
1Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Cell
|September 11, 2020
概括
在刺激性肠综合征 (IBS) 中研究肠道微生物组发现了亚型特定的微生物和代谢变化. 综合多组的数据确定了纯素代谢作为IBS的新疗法标.
科学领域:
- 胃肠病学
- 微生物组研究
- 系统生物学
背景情况:
- 肠道微生物在慢性胃肠道 (GI) 疾病 (如刺激性肠道综合征 (IBS)) 中的作用已得到认可,但机理性理解有限.
- 挑战包括动物和人类研究之间的差异以及缺乏综合的多种数据.
- 了解疾病特异性的生理变化需要采用整体方法.
研究的目的:
- 在IBS患者中整合纵向多组数据 (微生物组,代谢组,表观组,转录组).
- 识别IBS亚型特异性和与症状相关的微生物和宿主生理学的变化.
- 在IBS中发现具有治疗潜力的新宿主微生物代谢途径.
主要方法:
- 从肠道微生物组,代谢组,宿主表观基因组和转录组进行纵向多组数据集成.
- 微生物组成,功能和代谢物变化的分析.
- 微生物变化与IBS相关的主体生理机制的相关性.
主要成果:
- 在肠道微生物组成和功能中发现了IBS亚型特异性和与症状相关的变化.
- 与IBS相关的宿主生理机制相关的特定微生物代谢物.
- 发现代谢是IBS的新宿主微生物途径.
结论:
- 综合多组数据和纵向采样对于揭示慢性胃肠道疾病的功能机制至关重要.
- 已确定的纯素代谢途径为IBS提供了潜在的治疗点.
- 这种方法可以为慢性肠道疾病的综合治疗策略提供信息.
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