大麦泛基因组揭示了突变育种的隐藏遗产
Murukarthick Jayakodi1, Sudharsan Padmarasu1, Georg Haberer2
1Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Nature
|November 26, 2020
概括
这项研究介绍了第一个大麦泛基因组,通过20种不同的品种的染色体尺度组合揭示了广泛的遗传变异. 这种资源为改善作物育种和遗传研究解锁了隐藏的遗传多样性.
科学领域:
- 基因组学
- 植物科学
- 提高作物质量
背景情况:
- 遗传多样性对于作物改进至关重要,但单个参考基因组不足以捕捉物种的全部遗传变异 (泛基因组).
- 大麦 (Hordeum vulgare L.) 是一种重要的谷物作物,具有广泛的适应性,需要全面的基因组资源.
研究的目的:
- 通过生成20种不同大麦品种的染色体级序列组合,构建第一代大麦泛基因组.
- 列出基因组存在/不存在的变异,并研究结构变异以进行定量特征分析.
主要方法:
- 全基因组射击枪测序300个基因库加入.
- 构建20种代表性大麦基因型的染色体级序列组件.
- 基因组存在/不存在变异和结构变异的分析,包括大反转.
主要成果:
- 产生了20种不同大麦品种的染色体规模组合,形成了第一个大麦泛基因组.
- 列出了广泛的基因组存在/缺失变异,并确定了大量的大型反转多态.
- 精英大麦的两种频繁逆转的详细分析,一个与突变繁殖有关,另一个与地理范围的扩张有关.
结论:
- 第一代大麦泛基因组显著增加了以前隐藏的遗传变异.
- 这种资源将促进先进的遗传研究, 加快大麦改良的育种计划.
相关概念视频
Mutation, Gene Flow, and Genetic Drift
61.0K
In a population that is not at Hardy-Weinberg equilibrium, the frequency of alleles changes over time. Therefore, any deviations from the five conditions of Hardy-Weinberg equilibrium can alter the genetic variation of a given population. Conditions that change the genetic variability of a population include mutations, natural selection, non-random mating, gene flow, and genetic drift (small population size).
61.0K
Mutations in Microorganisms
304
Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
304
Mismatch Repair
5.9K
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
5.9K
Monohybrid Crosses
237.1K
Overview
237.1K
Genetic Variation
1.1K
Genetic variation is the diversity in DNA sequences found among individuals of the same species. This diversity is crucial for a species' survival because it helps organisms adapt to environmental changes. Genetic variation begins with fertilization, where an egg and sperm cell merge. Each of these cells carries 23 chromosomes, up to 46 in the fertilized egg. Chromosomes are long DNA strands that contain genes, the basic units of heredity.
Genes exist in different versions called alleles,...
Genes exist in different versions called alleles,...
1.1K
Plant Breeding and Biotechnology
20.8K
Crop cultivation has a long history in human civilization, with records showing the cultivation of cereal plants beginning at around 8000 BC. This early plant breeding was developed primarily to provide a steady supply of food.
20.8K


