单细胞表观遗传学揭示了人类皮层发育的机制
Ryan S Ziffra1,2,3,4,5, Chang N Kim1,2,3, Jayden M Ross1,2,3
1Department of Anatomy, University of California, San Francisco, San Francisco, CA, USA.
Nature
|October 7, 2021
概括
这项研究使用单细胞ATAC-seq (scATAC-seq) 对发育中的人类大脑的染色质可访问性进行映射. 它揭示了细胞类型特定的调节元素,并突出了体内发育和脑器官之间的差异.
科学领域:
- 神经科学
- 基因组学
- 发育生物学
背景情况:
- 染色体状态的变化对于细胞分化和基因调节在发育过程中至关重要.
- 细胞命运和发育大脑的地形特征是细胞特征和神经发育障碍的关键.
研究的目的:
- 在发育中的人类大脑中识别细胞类型特定的染色质可访问性模式.
- 了解控制神经发生和细胞命运规范的调节因素.
- 将人脑发育与大脑器官模型进行比较.
主要方法:
- 通过测序 (scATAC-seq) 对人类前脑主要组织进行单细胞检测.
- 无偏见的分析以确定细胞类型和大脑区域特异性的染色质可访问性.
- 整合性分析以预测细胞类型特定的候选调节元素.
主要成果:
- 在神经发生过程中确定了具有动态细胞类型特异性染色质可访问性变化的基因组位点.
- 大脑器官在很大程度上回顾了增强剂的可访问性,但错过了一些体内开放的染色体区域.
- 在皮层神经前代细胞中发现多样性,并涉及前额叶皮层神经谱系的信号传递.
结论:
- 在发育中的大脑中,染色质状态对细胞类型多样性和细胞命运规范有显著的贡献.
- 为评估大脑器官作为皮层发育模型的准确性提供了一个框架.
- 强调研究体内染色体动态对于理解大脑发育和疾病的重要性.
相关概念视频
Embryonic Stem Cells
25.8K
Embryonic stem (ES) cells are undifferentiated pluripotent cells, meaning they can produce any cell type in the body. This gives them tremendous potential in science and medicine since they can generate specific cell types for use in research or to replace body cells lost due to damage or disease.
25.8K
Determination
16.3K
During embryogenesis, cells become progressively committed to different fates through a two-step process: specification followed by determination. Specification is demonstrated by removing a segment of an early embryo, “neutrally” culturing the tissue in vitro—for example, in a petri dish with simple medium—and then observing the derivatives. If the cultured region gives rise to cell types that it would normally generate in the embryo, this means that it is specified. In...
16.3K
Zygotic Development And Stem Cell Formation
6.4K
The development of all multicellular organisms starts with the fusion of haploid cells called sperm and egg to form a diploid zygote. A zygote is a totipotent cell that can develop into a complete organism. The zygote undergoes cell division or cleavage to form an 8-cell mass. Until this stage, the cells are spherical, loosely attached, and remain totipotent. Totipotent cells are capable of developing both the embryonic and the extraembryonic tissues. However, as they continue to divide, they...
6.4K
Renewal of Skin Epidermal Stem Cells
2.4K
The skin is divided into epidermis, dermis, and hypodermis, the skin's outermost, middle, and inner layers. The human epidermal layer regularly undergoes renewal, where old, dead cells are replaced by new cells. Epidermal stem cells or EpiSCs divide and differentiate to restore the lost cells. For the renewal process, some EpiSCs continuously self-renew. In contrast, few others differentiate into transit-amplifying cells, which later form prickle or spinous cells, followed by granular...
2.4K
Somatic to iPS Cell Reprogramming
2.1K
Reprogramming alters the gene expression in somatic cells, transforming them into induced pluripotent stem (iPS) cells over several generations. Scientists can reprogram cells by introducing genes for four transcription factors—Oct4, Sox2, Klf4, and c-Myc (OSKM) by viral or non-viral methods. These factors are also known as Yamanaka factors after Shinya Yamanaka, who first generated iPS cells using mouse skin cells. Yamanaka was awarded the Nobel Prize in Physiology or Medicine in 2012...
2.1K
Cellular Differentiation
5.7K
How does a complex organism such as a human develop from a single cell? It all starts from a single fertilized egg which gives rise to a vast array of cell types, such as nerve cells, muscle cells, and epithelial cells that characterize the adult? Throughout development and adulthood, cellular differentiation leads cells to assume their final morphology and physiology. Differentiation is the process by which unspecialized cells become specialized to carry out distinct functions.
A zygote is a...
A zygote is a...
5.7K


