在X染色体上传播沉默的Xist核化局部蛋白质梯度
Yolanda Markaki1, Johnny Gan Chong1, Yuying Wang1
1Department of Biological Chemistry, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Cell
|November 23, 2021
概括
长非编码RNAXist形成了使X染色体沉默的复合体. 这些复合体使用蛋白质拥挤来调节许多基因,揭示了基因调节和核组织的新机制.
科学领域:
- 表观遗传学
- 分子生物学
- 遗传学
背景情况:
- 长非编码RNAXist对于X染色体的不活化至关重要.
- 通过XistRNA焦点调节众多X链基因的确切机制尚不清楚.
研究的目的:
- 阐明XistRNA焦点和相关蛋白质如何实现X染色体的转录沉默.
- 研究Xist核蛋白复合体的结构组织和调节功能.
主要方法:
- 超高分辨率显微镜可视化Xist焦点.
- 生物化学测试以表征Xist复合体内的蛋白相互作用.
- 染色体分析以评估基因沉默和紧缩.
主要成果:
- 囊的焦点很小,大约含有两个RNA分子,并形成超分子复合体 (SMAC).
- 这些SMAC聚焦SPEN蛋白,产生局部梯度,调节近位基因.
- 通过本质上混乱的地区来调解, 对于镇压至关重要.
- 通过SMAC招募多组蛋白质,导致染色体的紧缩和沉默的传播.
结论:
- 基因组RNA利用通过SMAC形成的功能核分离机制.
- 通过有限数量的RNA分子,SMAC内部的蛋白质拥挤使许多X链基因能够有效地沉默.
- 这项研究揭示了基因调节和核组织的新范式.
更多相关视频
10:01Production of Xenopus tropicalis Egg Extracts to Identify Microtubule-associated RNAs
Published on: June 27, 2013
13.9K
15:54Combined DNA-RNA Fluorescent In situ Hybridization FISH to Study X Chromosome Inactivation in Differentiated Female Mouse Embryonic Stem Cells
Published on: June 14, 2014
28.0K
相关概念视频
Inheritance of Chromatin Structures
6.8K
Epigenetics is the study of inherited changes in a cell's phenotype without changing the DNA sequences. It provides a form of memory for the differential gene expression pattern to maintain cell lineage, position-effect variegation, dosage compensation, and maintenance of chromatin structures such as telomeres and centromeres. For example, the structure and location of the centromere on chromosomes are epigenetically inherited. Its functionality is not dictated or ensured by the underlying...
6.8K
X-Inactivation
39.8K
The human X chromosome contains over ten times the number of genes as in the Y chromosome. Since males have only one X chromosome, and females have two, one might expect females to produce twice as many of the proteins, with undesirable results.
39.8K
siRNA - Small Interfering RNAs
17.2K
Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
17.2K
Epigenetic Regulation
31.5K
Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
31.5K
Chromatin Position Affects Gene Expression
24.0K
Chromatin is the massive complex of DNA and proteins packaged inside the nucleus. The complexity of chromatin folding and how it is packaged inside the nucleus greatly influences access to genetic information. Generally, the nucleus' periphery is considered transcriptionally repressive, while the cell's interior is considered a transcriptionally active area.
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
24.0K
Regulation of Nuclear Protein Sorting
2.6K
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
2.6K
