突变偏差反映了Arabidopsis thaliana中的自然选择
J Grey Monroe1,2, Thanvi Srikant3, Pablo Carbonell-Bejerano3
1Department of Molecular Biology, Max Planck Institute for Biology Tübingen, Tübingen, Germany. gmonroe@ucdavis.edu.
Nature
|January 13, 2022
概括
与进化论相反,阿拉比多普西斯的突变不是随机的. 表观遗传学因素偏向突变率,减少重要基因中的有害突变,并挑战突变作为无方向的进化力量的观点.
科学领域:
- 进化生物学
- 遗传学
- 植物科学
背景情况:
- 主流的进化理论认为突变是随机发生的,不论它们的功能影响如何.
- 这种假设指导了我们对分子进化的理解几十年.
研究的目的:
- 调查阿拉比多普西斯莉亚的新突变是否表现出非随机模式.
- 确定表观遗传学和物理特征在形成突变模式中的作用.
- 评估突变偏差对遗传多态和序列进化的影响.
主要方法:
- 在Arabidopsis thaliana中进行大规模的新突变调查.
- 独立基因组突变数据集的分析,包括大型突变积累实验.
- 突变频率与表观遗传学和物理基因组特征的相关性.
- 观察到的突变模式与自然加入中的遗传多态的比较.
主要成果:
- 在功能限制的基因组区域,包括基因体和基本基因中,突变频率显著降低.
- 表观遗传学和物理特征解释了基因周围全基因组突变模式的90%以上的差异.
- 观察到的突变频率准确地预测了自然Arabidopsis加入的遗传多态模式.
- 在较强的净化选择下,基因的突变率较低.
结论:
- 突变不是一个无方向的力量;表观基因组相关的突变偏差积极减少了Arabidopsis中的有害突变.
- 这一发现挑战了进化论中长期存在的范式.
- 突变偏差是围绕基因的序列进化模式的主要驱动因素.
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