短距离脊柱二面旋转调节内在无序蛋白质的内部摩擦
Debapriya Das1,2, Lisha Arora1,2, Samrat Mukhopadhyay1,2,3
1Centre for Protein Science, Design and Engineering, Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, Sector 81, Mohali, SAS Nagar, Punjab 140306, India.
Journal of the American Chemical Society
|January 24, 2022
概括
固有无序蛋白质 (IDP) 的内部摩擦源于脊柱二面障碍,而不仅仅是溶剂粘度. 序列特定的残留物,如素和甘氨酸会调节这种摩擦,影响蛋白质的动态.
科学领域:
- 生物物理
- 蛋白质动力学
- 分子相互作用
背景情况:
- 蛋白质折叠和动力学受到溶剂粘度和内部摩擦的影响.
- 内部摩擦是聚链对形状变化的内在阻力.
- 固有无序蛋白质 (IDP) 中的内部摩擦的分子起源尚不清楚.
研究的目的:
- 为了研究内部摩擦的分子起源.
- 为了证明特定序列的骨干二面屏障可以控制局部内部摩擦.
- 分析特定氨基酸在调节内部摩擦中的作用.
主要方法:
- 位点定向的光脱极化动力学.
- 用皮科秒时间解析的光异性测量.
- 使用线性粘度依赖模型对二面松时间的分析.
主要成果:
- 确定了特定序列的骨干二面屏障作为局部内部摩擦的来源.
- 在不含的部分观察到较低的内部摩擦,在含的部分观察到较高的内部摩擦.
- 证明甘氨酸可以弥补林带来的扭曲硬性.
结论:
- 在IDP中,局部内部摩擦是由特定序列的二面屏障控制的.
- 氨基酸序列,特别是和甘氨酸,在调节内部摩擦方面起着至关重要的作用.
- 了解局部内部摩擦是理解折叠,结合和组装中的IDP行为的关键.
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