通过序列基因组编辑实现时间解析的多符号分子记录器
Junhong Choi1,2, Wei Chen3,4, Anna Minkina3
1Department of Genome Sciences, University of Washington, Seattle, WA, USA. junhongc@uw.edu.
Nature
|July 6, 2022
概括
通过使用序列基因组编辑来捕获事件顺序和数千个符号, DNA Typewriter 能够精确地进行体内分子记录. 这种基于DNA的系统克服了当前记录技术的局限性.
科学领域:
- 分子生物学
- 遗传学
- 生物技术
背景情况:
- DNA是适合生物分子记录的介质.
- 目前基于DNA的存储器在记录能力和事件顺序方面存在局限性.
- 现有的技术难以捕捉复杂的生物历史.
研究的目的:
- 介绍DNA打字机, 这是一个新的生物分子记录系统.
- 克服现有的基于DNA的记录方法的局限性.
- 为了证明生物事件的高容量,保持秩序的记录.
主要方法:
- 开发了使用CRISPR-Cas9目标部位的"DNA磁带".
- 使用短插入编辑作为符号来记录主要编辑指导RNA身份.
- 实现了序列基因组编辑以保持记录的顺序.
- 整合了单细胞RNA测序以重建血统.
主要成果:
- 记录和解码成千上万的符号和复杂的事件历史.
- 已成功记录短信.
- 评估直角DNA磁带的性能,并为连续事件构建"长磁带".
- 重建了一个由3,257个细胞组成的单体细胞系.
- 显示序列编辑至少在 20 代和 25 天内保持.
结论:
- DNA打字机提供了一个强大的平台,用于高容量,维护 vivo 分子记录.
- 该系统成功地捕获了复杂的生物事件历史和细胞系.
- 这项技术提升了DNA数字数据存储和生物记录的潜力.
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