转录调节器按图案充电块的功能分区
Heankel Lyons1, Reshma T Veettil1, Prashant Pradhan1
1Laboratory of Nuclear Organization, Cecil H. and Ida Green Center for Reproductive Biology Sciences, Division of Basic Research, Department of Obstetrics and Gynecology, Department of Molecular Biology, Hamon Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Cell
|January 5, 2023
概括
MED1的内在无序区域 (IDR) 形成凝聚物,选择性地分隔转录机制,包括RNA聚合酶II. 这种选择性分离对于基因激活和调节细胞过程至关重要.
科学领域:
- 生物化学
- 分子生物学
- 细胞生物学
背景情况:
- 特定的蛋白质分裂成生物分子凝聚物是细胞功能的关键.
- 本质上无序区域 (IDR) 在调解这种特异性的作用尚未完全理解.
研究的目的:
- 调查内在无序区域 (IDR) 如何调解转录凝聚物中的选择性蛋白分离.
- 确定MED1IDRs在调节转录和基因激活中的作用.
主要方法:
- 由MED1的内在无序区域 (IDR) 形成的利用的冷凝物.
- 研究了RNA聚合酶II及其调节物的选择性分离.
- 分析了IDR中图案充电块的必要性和充分性,以进行分区和功能.
主要成果:
- MED1 IDR 凝聚剂可以选择性地分离阳性,但不包括阴性转录调节剂.
- 这种选择性分离激活了转录,并且在细胞状态转换期间对基因激活至关重要.
- 在IDR中交替充电的氨基酸块对于选择性分离和功能性基因激活至关重要.
结论:
- 疾病介导的相互作用,IDR中的特定模式的充电块,使选择性蛋白质分离成为可能.
- 这种MED1 IDR凝聚物的选择性分离通过缩功能蛋白组合来调节生物化学途径,例如转录.
相关概念视频
Cooperative Binding of Transcription Regulators
6.5K
Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome. Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form...
6.5K
Cis-regulatory Sequences
10.0K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
10.0K
RNA Polymerase II Accessory Proteins
9.3K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.3K
Master Transcription Regulators
7.0K
Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
7.0K
Co-activators and Co-repressors
7.4K
Gene transcription is regulated by the synergistic action of several proteins that form a complex at a gene regulatory site. This is observed in eukaryotes, where the regulation of gene expression is a complex process. Regulatory proteins in eukaryotes can broadly be classified into two types – regulators that bind directly to specific DNA sequences and co-regulators that associate with regulatory proteins but cannot directly bind to the DNA. These co-regulators are further divided into...
7.4K
Combinatorial Gene Control
8.4K
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
8.4K


