来自Saccharomyces eubayanus的转录延长因子Paf1核心复合物的结构基础
Yan Qin1, Yuqiao Zhou1, Yinghua Cao1
1Key Laboratory of Cell Proliferation and Regulation Biology of Ministry of Education, College of Life Sciences, Beijing Normal University, 19 Xinjiekouwai Avenue, Beijing 100875, China.
International journal of molecular sciences
|May 27, 2023
概括
研究人员确定了酵母聚合酶关联因子1复合体 (PAF1C) 的高分辨率结构. 这揭示了其核心组件之间的详细相互作用,包括一个新的Rtf1结合部位,进步对转录调节的理解.
科学领域:
- 分子生物学分子生物学
- 结构生物学 结构生物学
- 遗传学 是一个遗传学.
背景情况:
- 聚合酶相关因子1复合体 (PAF1C) 对于RNA聚合酶II转录延长至关重要.
- PAF1C通过聚合酶关联和表观遗传色素修饰影响转录.
- 了解PAF1C的分子机制需要高分辨率的结构数据.
研究的目的:
- 为了确定酵母PAF1C核心复合物的高分辨率结构.
- 为了阐明核心组件之间的相互作用细节:Ctr9,Paf1,Cdc73和Rtf1.
- 研究Rtf1的进化变化及其对PAF1C结合的影响.
主要方法:
- 酵母PAF1C核心复合物的高分辨率结构分析.
- 生物化学测试用于观察成分相互作用.
- 在不同物种中对Rtf1进行比较序列分析.
主要成果:
- 酵母PAF1C核心的详细结构模型 (Ctr9, Paf1, Cdc73, Rtf1).
- 在PAF1C.中确定Rtf1的以前未知的结合表面.
- 在Rtf1的C端序列中存在显著的进化分歧的证据,可能会影响物种特定的结合亲和关系.
结论:
- 这项研究提供了酵母PAF1C的精确结构模型.
- 这个模型阐明了复杂体内的分子相互作用.
- 这些发现有助于更深入地了解酵母PAF1C的分子机制和体内功能.
相关概念视频
Transcription Elongation Factors
11.0K
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
11.0K
Transcription Initiation
16.5K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.5K
Transcription in Prokaryotes
107
Transcription is a highly regulated process that converts genetic information into RNA molecules. The transcription cycle is divided into three key stages: initiation, elongation, and termination, each driven by specific molecular mechanisms.Initiation of TranscriptionIn bacteria, transcription begins when the RNA polymerase core enzyme associates with a sigma factor to form a holoenzyme. For example, the E. coli sigma factor called σ70 forms a holoenzyme, which recognizes the -10 (Pribnow...
107
Transcription Attenuation in Prokaryotes
15.6K
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
15.6K
General Transcription Factors
5.4K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.4K
RNA Polymerase II Accessory Proteins
9.3K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.3K


