使用CRISPR-Cas12a基于特定序列标签检测Burkholderia pseudomallei的检测
Jia-Xin Zhang1, Jian-Hao Xu1, Bing Yuan1
1State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Frontiers in public health
|May 30, 2023
概括
一种新的双重目标方法能够快速准确地检测出Burkholderia pseudomallei (B. pseudomallei),这是导致性疹的原因. 这种RPA-CRISPR/Cas12a测定有助于及时诊断和控制这一重大公共卫生威胁.
科学领域:
- 微生物学与传染病的研究
- 分子诊断学 分子诊断学
- 基因组学就是基因组学.
背景情况:
- 由Burkholderia pseudomallei (B. pseudomallei) 引起的梅病是严重的公共卫生问题.
- 准确和快速检测B. pseudomallei对于治疗乳腺炎症至关重要.
- 将B. pseudomallei与密切相关的物种区分开来是一个诊断挑战.
研究的目的:
- 开发一种新的双重目标方法,用于特定和快速识别B. pseudomallei.
- 为了在临床和环境样本中早期检测B. pseudomallei.
- 改进预防和控制粉症的策略.
主要方法:
- 1722年B. pseudomallei菌株的基因组分析,以构建大规模的基因组.
- 从核心基因组中选择特定的序列标签 (LC1和LC2) 来进行差异化.
- 选择的标签与重组酶聚合酶放大 (RPA) 和CRISPR-Cas12a系统的集成.
主要成果:
- 双目标RPA-CRISPR/Cas12a试验实现了高灵敏度:0.2个副本/反应 (LC1) 和2个副本/反应 (LC2).
- 检测极限低至LC1的10 fg基因组DNA和LC2的20 fg.
- 该方法在40分钟内准确地检测到人类血液和湿土样本中的B. pseudomallei.
结论:
- 双重目标的RPA-CRISPR/Cas12a方法为B. pseudomallei的识别提供了一个快速而准确的工具.
- 这种测定对于临床诊断和B. pseudomallei.环境监测都是有价值的.
- 开发的方法显著有助于及时预防和控制乳腺粉症.
相关概念视频
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CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats is a adaptive immune system found in bacteria and archaea that protects against viral infections. This system enables prokaryotic cells to identify, remember, and neutralize foreign genetic elements, primarily bacteriophages, by storing fragments of the invader’s DNA as a genetic memory.The CRISPR immune response begins during an initial infection. Cas (CRISPR-associated) proteins play a central role in this...
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