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使用GGCAT非常快速地构建和查询压缩和彩色的de Bruijn图形

Andrea Cracco1, Alexandru I Tomescu2

  • 1Department of Computer Science, University of Verona, 37134 Verona, Italy; alexandru.tomescu@helsinki.fi andrea.cracco@univr.it.

Genome research
|May 30, 2023
PubMed
概括

GGCAT是一个新的工具,可以有效地构建紧的de Bruijn图和它们的彩色变体,用于基因组学. 与现有的方法相比,它显著加快了图形构建和序列查询的速度.

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