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相关概念视频

Introduction to Actin01:26

Introduction to Actin

5.2K
Actin is a highly conserved cytoskeletal protein found abundantly in eukaryotic cells. It constitutes 10% weight of the total cellular protein in muscle cells, while in non-muscle cells, it is lower and makes up around 1–5 percent of the total cell protein. Actin found in the unicellular amoebae and complex multicellular animals is around 80% similar, demonstrating their conservation over a billion years of evolution.  Actin coding genes are conserved within species and across...
5.2K
Actin Treadmilling01:18

Actin Treadmilling

8.1K
Actin filaments undergo polymerization and depolymerization from either end. The polymerization and depolymerization rates depend on the cytosolic concentration of free G-actins. The polymerization rate is generally higher at the plus or barbed end, while the depolymerization rate is higher at the minus or pointed end. At a steady state, critical concentration describes the concentration of free G-actin monomers at which the polymerization rate at the plus end is equal to that of the...
8.1K
Generation of Straight or Branched Actin Filaments01:14

Generation of Straight or Branched Actin Filaments

3.0K
The straight or branched structure formation of actin filaments is controlled by nucleating proteins such as the formins and Arp2/3 complex. Formin-mediated assembly results in straight filaments, whereas Arp2/3 protein complex-mediated assembly results in branched actin filaments.
Arp2/3 Complex
Arp2/3 complex is a seven-subunit complex consisting of two proteins similar to actin- Arp2 and Arp3, and five other subunits that help keep Arp2 and Arp3 inactive. When required, the complex is...
3.0K
Formation of Higher-order Actin Filaments01:11

Formation of Higher-order Actin Filaments

3.0K
The polymerization of G-actin monomers into filamentous F-actin is a multi-step process. Once the F-actins are formed, they can bundle together in different arrangements to form higher-order networks and regulate cellular functions. Common examples include the formation of lamellipodia and filopodia at the cell's leading edge by actin reorganization in a migrating cell. The microvilli on the brush border epithelial cells are also formed through the F-actin network.
The high-order actin...
3.0K
Studying the Cytoskeleton01:17

Studying the Cytoskeleton

6.3K
The cytoskeletal architecture can be studied using different microscopic and biochemical techniques. Electron microscopy was instrumental in discovering the cytoskeletal architecture around the 1960s, which allowed obtaining structural information at a high-resolution level. However, the sample preparation procedure often limits this ability in biological samples. Several protocols have been developed over the years to optimize sample preparation. In one of the protocols known as rotary...
6.3K
Actin Filament Depolymerization01:19

Actin Filament Depolymerization

3.1K
Actin filaments (F-actin) are composed of actin subunits. The dissociation of actin monomers can occur from either end of F-actin. The rate of dissociation is faster from the minus-end or the pointed end, where the actin subunits exist with a bound ADP, together known as ADP-actin. The depolymerization of F-actin is aided by proteins, including the actin-depolymerizing factor (ADF) and cofilin family of proteins, gelsolin, and glia maturation factor (GMF).
In F-actin, the ADF/cofilin proteins...
3.1K

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相关实验视频

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Analyzing the α-Actinin Network in Human iPSC-Derived Cardiomyocytes Using Single Molecule Localization Microscopy
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Analyzing the α-Actinin Network in Human iPSC-Derived Cardiomyocytes Using Single Molecule Localization Microscopy

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一个深度学习框架,用于对actin微基的定量分析.

Rajasekaran Bhavna1,2, Mahendra Sonawane3

  • 1Department of Biological Sciences, Tata Institute of Fundamental Research, Colaba, Mumbai, 400005, India. bhavnarajasekaran@yahoo.com.

NPJ systems biology and applications
|June 2, 2023
PubMed
概括

研究人员开发了一种深度学习方法来分析微桥,揭示了它们的机械特性和斑马鱼表皮细胞中独特的actomyosin网络调节. 这为表皮细胞发育和模式机制提供了新的见解.

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Using Microfluidics and Fluorescence Microscopy to Study the Assembly Dynamics of Single Actin Filaments and Bundles
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Using Microfluidics and Fluorescence Microscopy to Study the Assembly Dynamics of Single Actin Filaments and Bundles

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Analyses of Actin Dynamics, Clutch Coupling and Traction Force for Growth Cone Advance
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Analyses of Actin Dynamics, Clutch Coupling and Traction Force for Growth Cone Advance

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Analyzing the α-Actinin Network in Human iPSC-Derived Cardiomyocytes Using Single Molecule Localization Microscopy
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Using Microfluidics and Fluorescence Microscopy to Study the Assembly Dynamics of Single Actin Filaments and Bundles
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Analyses of Actin Dynamics, Clutch Coupling and Traction Force for Growth Cone Advance
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科学领域:

  • 细胞生物学 细胞生物学
  • 生物物理学的生物物理.
  • 发展生物学 发展生物学

背景情况:

  • 微是状表皮上状表皮上富含actin的细胞表面突起.
  • 他们在斑马鱼中的动态模式是由actomyosin网络驱动的,但人们对其了解甚少.
  • 现有的计算方法限制了定量分析.

研究的目的:

  • 开发一个用于分析微树形态和动态的计算框架.
  • 量化研究微脊的生物物理机械特性.
  • 了解actomyosin网络在微树模式形成中的作用.

主要方法:

  • 一个深度学习策略,用于高精度的microridge细分 (~95%的像素级).
  • 从细分图像中估计有效的microridge持久长度.
  • 分析机械波动和储存应力在微树模式.

主要成果:

  • 量化微特征,估计有效持久长度为6.1μm.
  • 根据储存的压力,确定了黄细胞和侧面上皮细胞之间的独特的actomyosin网络调节.
  • 观察到与模式重新排列相关的自发性actin集群动态.

结论:

  • 开发的深度学习框架使微桥梁的大规模时空分析成为可能.
  • 洞察了在上皮细胞发育期间的微脊机械和actomyosin网络调节.
  • 提供了一个工具来探测微电池对遗传和化学扰动的反应.