甲尼丁是氨酸降解途径的中心中间体,也是Bacillus subtilis中其调节的中心中间体
Robert Warneke1, Tim Benedict Garbers2, Christina Herzberg1
1Department of General Microbiology, Institute for Microbiology & Genetics, GZMB, Georg-August-University Göttingen, Göttingen, Germany.
The Journal of biological chemistry
|June 21, 2023
概括
细菌细菌通过Roc路径降解氨酸,氨酸和甲氨酸. 甲尼丁被认为是激活roc基因转录的关键诱导分子.
科学领域:
- 微生物学 微生物学
- 生物化学 生物化学
- 分子生物学分子生物学
背景情况:
- 细菌细菌利用各种氨基酸来满足代谢需求.
- 在rocABC,rocDEF操作子,和rocG基因编码酶为阿尔金因,素和素代谢.
- 基因表达受替代西格玛因子SigL和RocR转录激活器的调节.
研究的目的:
- 研究Roc通路酶在氨基酸降解中的特定作用.
- 确定诱导RocR介导转录激活的分子效应因子.
- 阐明roc基因调节的机制.
主要方法:
- 使用纯化的酶进行生物化学测试.
- 在体外酶活性分析.
- 转录记者的测定.
- 生物化学实验以确定分子效应器.
主要成果:
- 鉴定出RocB是一种依赖的N-carbamoyl-L-ornithine水解酶,可以将素转化为ornithine.
- 欧尼丁被证实是RocR活动的分子诱导剂.
- ATP 结合诱导RocR 六合化,随后是鸟结合,ATP 水解和roc基因转录激活.
结论:
- 甲尼丁是roc降解途径中的中心分子,作为一种常见的中间体和主要的分子效应剂.
- 这项研究澄清了Bacillus subtilis中的Roc途径的代谢作用和调节机制.
- 这项工作提供了对这种细菌中氨基酸代谢和基因调节的详细了解.
关键词:
这种细菌是 Bacillus subtilis.洛克洛克洛克洛克洛克洛克洛克阿尔金因的代谢过程细菌遗传学 细菌遗传学细菌的新陈代谢是细菌的代谢.细菌转录 细菌转录非蛋白质原氨基酸的非蛋白质原氨基酸.转录因子的转录因子更多相关视频
08:03A Tandem Liquid Chromatography–Mass Spectrometry-based Approach for Metabolite Analysis of Staphylococcus aureus
Published on: March 28, 2017
10.2K
09:27Functional Complementation Analysis FCA: A Laboratory Exercise Designed and Implemented to Supplement the Teaching of Biochemical Pathways
Published on: June 24, 2016
17.7K
相关概念视频
Urea Cycle
45.0K
The urea cycle describes how liver cells convert ammonia to urea. Ammonia is a toxic waste product of protein catabolism. Land animals must convert ammonia into the less toxic urea which can be safely eliminated by the kidneys through urine. Marine animals excrete ammonia directly, and the surrounding water dilutes the ammonia to safe levels.
45.0K
Inorganic Nitrogen Assimilation
49
Nitrogen is an essential element in biological systems, forming a crucial component of proteins, nucleic acids, and other cellular constituents. Many bacteria and archaea acquire nitrogen in the form of nitrate (NO₃⁻) or ammonia (NH₃), which are then assimilated into biomolecules through specific enzymatic pathways.Assimilatory Nitrate ReductionWhen nitrate enters the cell, it undergoes a two-step reduction process known as assimilatory nitrate reduction. Initially, the enzyme...
49
Amino Acid Biosynthetic Pathways
43
Amino acid biosynthesis is essential for cell growth, protein synthesis, and metabolic regulation. Cells generate essential and non-essential amino acids from metabolic intermediates to sustain vital biological functions. These intermediates originate from key metabolic pathways: glycolysis, the tricarboxylic acid (TCA) cycle, and the pentose phosphate pathway. Important precursors include α-ketoglutarate, pyruvate, oxaloacetate, phosphoenolpyruvate, and erythrose-4-phosphate, which...
43
Regulation of Expression at Multiple Steps
951
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
951
Amino Acid Catabolism
59
Microorganisms rely on proteins as an essential carbon and energy source, particularly in environments with limited polysaccharides or lipids. However, proteins are too large to cross the plasma membrane unaided, necessitating enzymatic degradation. Microbes secrete extracellular proteases and peptidases that hydrolyze proteins into peptides, which can then be transported across the membrane. Once inside the cell, intracellular proteases degrade these peptides into free amino acids, which...
59
Biosynthesis in Bacteria
41
Biosynthesis in bacteria is a fundamental anabolic process that generates essential macromolecules, including proteins, nucleic acids, lipids, and polysaccharides. These macromolecules are critical for cellular growth, replication, and function. The process is tightly regulated and energetically linked to catabolic pathways to ensure optimal resource utilization.Biosynthetic pathways begin with precursor metabolites such as pyruvate, acetyl-CoA, and glucose-6-phosphate derived from glycolysis,...
41
