在人类细胞中发现和描述病毒转录效应因子的高通量发现和特征
Connor H Ludwig1, Abby R Thurm2, David W Morgens3
1Bioengineering Department, Stanford University, Stanford, CA 94305, USA.
Cell systems
|June 22, 2023
概括
科学家们确定了数百个病毒蛋白域,这些域调节了冠状病毒和疹病毒的基因转录. 这一发现扩大了病毒蛋白知识,并为基因调节研究提供了新的工具.
科学领域:
- 病毒学 病毒学
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
背景情况:
- 病毒利用转录调节蛋白来控制病毒和宿主基因表达.
- 由于蛋白质的多功能性和序列分歧,负责转录调节的特定病毒蛋白质和序列在很大程度上是未知的.
研究的目的:
- 系统地识别和描述具有转录调节功能的病毒蛋白域.
- 调查这些监管活动背后的序列动机和机制.
主要方法:
- 使用高通量测试来测量来自11种冠状病毒和9种人类疹病毒的6万多个蛋白质的转录调节潜力.
- 使用高通量序列和化学扰动来研究已识别的效应域的机制.
主要成果:
- 在研究的病毒中发现了数百个转录效应因子域.
- 在所有冠状病毒Spike同类物体中发现了一个保存的抑制域.
- 在病毒干扰素调节因子 (VIRF) 中确定了双激活-抑制域,在疹病毒单链DNA结合蛋白同类物中发现了一个激活域,这对KSHV复制至关重要.
结论:
- 这项研究大大扩展了参与基因调节的病毒蛋白的注释.
- 鉴定到的效应因子域为病毒生物学和潜在的治疗点提供了新的见解.
- 这些域代表了开发紧基因调节工具的新型候选人.
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