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相关概念视频

Nucleic Acid Structure01:25

Nucleic Acid Structure

6.2K
The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms  a 5′ to 3′ phosphodiester linkage.
DNA Structure
DNA...
6.2K
Angle of Twist - Elastic Range01:13

Angle of Twist - Elastic Range

362
Consider a cylindrical shaft with a length denoted by L and a consistent cross-sectional radius referred to as r. This shaft undergoes a torque at the free end. The highest shearing strain within the shaft is directly proportional to the twist angle and the radial distance from the shaft axis. When the shaft behaves elastically, this shearing strain can be articulated using variables such as the applied torque, radial distance, the polar moment of inertia, and the modulus of rigidity. By...
362
DNA Topoisomerases02:02

DNA Topoisomerases

31.5K
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
31.5K
The DNA Helix01:07

The DNA Helix

20.9K
Deoxyribonucleic acid, or DNA, is the genetic material responsible for passing traits from generation to generation in all organisms and most viruses. DNA is composed of two strands of nucleotides that wind around each other to form a spring-like structure called a double helix. However, the double helix is not perfectly symmetrical. Instead, there are regularly occurring grooves in the structure. The major groove occurs where the sugar-phosphate backbones are relatively far apart. This space...
20.9K
Nucleic acids02:43

Nucleic acids

163.9K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
163.9K
Nucleic Acids02:43

Nucleic Acids

44.4K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
44.4K

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相关实验视频

Updated: Jul 25, 2025

Stretching Short Sequences of DNA with Constant Force Axial Optical Tweezers
08:48

Stretching Short Sequences of DNA with Constant Force Axial Optical Tweezers

Published on: October 13, 2011

13.1K

核酸中的扭曲-拉伸关系.

Marco Zoli1

  • 1School of Science and Technology, University of Camerino, 62032, Camerino, Italy. marco.zoli@unicam.it.

European biophysics journal : EBJ
|June 25, 2023
PubMed
概括

双链RNA和DNA在拉伸时表现出相反的机械行为,这一发现由新的螺旋模型解释. 这个模型准确地预测了这两种核酸类型的扭曲拉伸特性.

科学领域:

  • 分子生物物理学 分子生物物理学
  • 结构生物学 结构生物学
  • 计算生物学 计算生物学

背景情况:

  • 核酸 (RNA和DNA) 是生物功能必不可少的动态螺旋分子.
  • 实验研究显示,双链RNA (dsRNA) 和双链DNA (dsDNA) 在紧张状态下有明显的扭曲伸展反应.
  • 了解这些机械性质对于理解分子相互作用和细胞过程至关重要.

研究的目的:

  • 开发一种理论模型,解释dSRNA和dSDNA的差异性机械行为.
  • 研究分子结构,基对波动和宏观螺旋性质之间的关系.
  • 以计算方式预测A型RNA和B型DNA片段的扭曲-拉伸反应.

主要方法:

  • 开发一个三维的美索斯科普哈密尔顿模型,其中包含基数对的辐射,曲和扭曲波动.
  • 包括A型RNA和B型DNA螺旋体的关键结构特征.
  • 路径积分技术的应用,以计算平均螺旋重复作为施加负载的函数.

主要成果:

  • 该模型成功地复制了dSRNA和dSDNA之间观察到的相反的扭曲拉伸模式.
  • 对短螺旋片段的螺旋重复和拉伸性能与较长分子的实验数据一致.
  • 该模型阐明了基对波动在确定宏观机械性质中的作用.
关键词:
螺旋式重复的重复中等镜的哈密尔顿模型.核酸的灵活性 核酸的灵活性路径积分方法 路径积分方法扭曲-拉伸关系的关系

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Magnetic Tweezers for the Measurement of Twist and Torque

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Analyzing and Building Nucleic Acid Structures with 3DNA

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相关实验视频

Last Updated: Jul 25, 2025

Stretching Short Sequences of DNA with Constant Force Axial Optical Tweezers
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Stretching Short Sequences of DNA with Constant Force Axial Optical Tweezers

Published on: October 13, 2011

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Magnetic Tweezers for the Measurement of Twist and Torque
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Magnetic Tweezers for the Measurement of Twist and Torque

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Analyzing and Building Nucleic Acid Structures with 3DNA
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结论:

  • 开发的模型提供了一个统一的框架,用于理解dsRNA和dsDNA的独特机械行为.
  • 基对的波动显著影响螺旋核酸的扭曲-拉伸反应.
  • 这项工作提供了关于核酸在介面层面的机制的见解,与它们的生物学作用相关.