转基因酶表达,元素丰富度,元素大小和DNA修复决定了PIF/Pong转基因元素的移动性和遗传性
Priscilla S Redd1, Lisette Payero1,2, David M Gilbert1
1Department of Biology and Geology, University of South Carolina Aiken, Aiken, SC, United States.
Frontiers in cell and developmental biology
|June 26, 2023
概括
像mPing这样的II类DNA可转移元素,可以增加拷贝数. 酵母试验揭示了较小的元素大小和特定的修复机制增强了它们的转移和插入基因组.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 进化生物学 进化生物学
背景情况:
- 第二类DNA可移植元素 (TE) 是真核生物基因组的重要组成部分.
- 通过调动,TEs有助于基因组进化,需要足够的复制才能持续存在.
- 测试特征的"切割和粘贴"机制本质上不包括复制,但观察到复制数量的增加.
研究的目的:
- 调查影响大米衍生的mPing和相关的II类TE转移的参数.
- 开发用于测量TE插入和测序插入部位的新方法.
- 了解TEs如何塑造真核生物基因组.
主要方法:
- 利用酵母转换试验来分析mPing和相关元素的行为.
- 开发了用于量化元素插入和表征插入地点的新策略.
- 检查了元素大小,转体酶表达和酵母 ploidy 对转化的影响.
主要成果:
- 增加的转体酶表达增强了较小元素 (430 bp) 的调动,但抑制了较大的元素 (7,126 bp).
- 较小的元素大小与切除和插入频率的增加相关.
- 酵母化提供了通过同质依赖修复进行复制性转移的证据,优先插入rDNA重复.
结论:
- 已经确定了影响TE转换的参数,例如元素大小和宿主修复途径.
- 这些发现有助于利用TE用于基因发现和基因组编辑.
- 对II类TE行为的洞察力揭示了它们在形成真核生物基因组中的作用.
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