在全基因组高血压研究中检测遗传标记集和环境之间的相互作用
Linchuan Shen1, Amei Amei1, Bowen Liu1
1Department of Mathematical Sciences, University of Nevada, Las Vegas.
bioRxiv : the preprint server for biology
|July 3, 2023
概括
检测基因环境相互作用对于理解复杂疾病至关重要. 新的方法MAGEIT_RAN和MAGEIT_FIX有效地识别了涉及常见和罕见遗传变异的相互作用,改善了疾病风险预测.
科学领域:
- 遗传学和流行病学
- 复杂疾病研究 复杂疾病研究
- 生物统计学 生物统计学
背景情况:
- 复杂的疾病源于基因与环境的相互作用,需要检测基因与环境相互作用 (GEI) 的方法.
- 现有的GEI检测方法通常专注于常见或罕见的变异.
- 对大型遗传流行病学研究的准确分析需要对GEI进行强大的定量工具.
结论:
- 确定了两个基因,CCNDBP1和EPB42,与酒精消费相互作用,影响血压.
- 路径分析揭示了16条与信号转导和与高血压相关的发展相关的重要路径.
- MAGEIT成功检测了涉及GEI复杂特征的生物相关基因.
更多相关视频
11:35Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA
Published on: August 21, 2016
13.0K
08:09Gene-environment Interaction Models to Unmask Susceptibility Mechanisms in Parkinson's Disease
Published on: January 7, 2014
7.6K
相关概念视频
Genome-wide Association Studies-GWAS
13.6K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
13.6K
Gene-Environment Interactions
367
Gene expression is a dynamic process that is significantly influenced by environmental factors. This interaction underlies the complex nature of biological development and the phenotypic differences observed among individuals, even among those with identical genetic makeups. Factors such as radiation, temperature, behavior, nutrition, and stress play pivotal roles in determining how genes are expressed. The concept of the reaction range is central to understanding this interaction. It posits...
367
Human Genetics
619
Human genetics provides a profound framework for understanding the interplay between genetic predispositions and human psychology. At the heart of this discipline lies the study of how genes influence physical traits, behaviors, and susceptibility to diseases. Each person carries a unique genetic code that subtly or significantly shapes their psychological and behavioral landscape.
The complex relationship between genetics and psychology is observable through common biological components such...
The complex relationship between genetics and psychology is observable through common biological components such...
619
Behavioral Genetics and Its Designs
413
Behavior genetics explores how genetic inheritance influences human behavior. It focuses on how genes, passed from parents to offspring, contribute to the development of behavioral traits and tendencies. This branch of genetics seeks to understand the complex interplay between inherited genetic factors and environmental influences in shaping our behaviors.
The primary methodologies used in behavior genetics include family studies, twin studies, and adoption studies, each providing unique...
The primary methodologies used in behavior genetics include family studies, twin studies, and adoption studies, each providing unique...
413
Heritability
238
Heritability is a statistical concept that measures the degree to which genetic differences among individuals contribute to trait variations within a population. It is a fundamental idea in genetics, often prone to misinterpretation. Heritability is expressed as a percentage, reflecting the proportion of variation in a specific trait across a population that can be linked to genetic differences. However, it's important to understand that heritability does not determine how "genetic"...
238
Background and Environment Affect Phenotype
6.6K
Although the genetic makeup of an organism plays a major role in determining the phenotype, there are also several environmental factors, such as temperature, oxygen availability, presence of mutagens, that can alter an organism’s phenotype.
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
6.6K
