可编程RNA引导的内核酶在真核生物及其病毒中广泛存在
Kaiyi Jiang1,2, Justin Lim1, Samantha Sgrizzi1
1McGovern Institute for Brain Research at MIT, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
bioRxiv : the preprint server for biology
|July 3, 2023
概括
科学家们发现了HERMES,它是来自 prokaryotic TnpB 蛋白质的真核生物中的新型RNA 导向核酶. 这些系统适应了真核细胞,并显示了基因组编辑应用的潜力.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 生物技术是生物技术.
背景情况:
- TnpB蛋白质是与IS200/605转位子连接的原生 RNA 导向核酶.
- 确定了真核生物同类物,Fanzors,但它们的功能仍然未知.
研究的目的:
- 在真核生物中研究TnpB同类的活性和功能.
- 在真核生物基因组中描述新型RNA导向核酶.
主要方法:
- 在真核生物和病毒中全基因组搜索TnpB同类物.
- 核酶的遗传学重建,重新命名为HERMES.
- 生物化学和细胞分析以确定功能和DNA裂变活性.
主要成果:
- 确定了许多真核TnpB同类物,称为HERMES,与移动遗传元素相关.
- HERMES 蛋白质对真核细胞具有广泛的适应性,包括核定位信号和内核捕获.
- 已证明的HERMES利用相邻的非编码RNA进行RNA引导的双链DNA裂变,并重新排列了RuvC催化部位.
结论:
- 赫尔梅斯代表了一种具有独特进化起源的真核RNA导向核酶的新型类.
- 证明了HERMES在人类细胞中的基因组编辑潜力.
- 突出了这些自然存在的真核生物系统的生物技术应用.
相关概念视频
CRISPR and crRNAs
17.1K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
17.1K
Ribozymes
12.3K
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can...
Ribozymes can...
12.3K
Restriction Enzymes
31.0K
Restriction enzymes are bacterial enzymes used to cut DNA in a sequence-specific manner. To cleave DNA, they bind to specific palindromic sequences called restriction sites. Such palindromic DNA sequences or inverted repeats are commonly found in regions of functional significance, such as the origin of replication, gene operator sites, and regions containing transcription termination signals.
The host bacteria protect their own genomic DNA from these enzymes by methylating these sites. Some...
The host bacteria protect their own genomic DNA from these enzymes by methylating these sites. Some...
31.0K
Viruses with RNA Genomes
58
RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...
58
CRISPR/Cas9 Genome Editing
73
The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
73
Retroviruses
12.4K
Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
12.4K


