甲基因组测序检测到从聚集的环境中收集的空气样本中的人类呼吸道和肠道病毒
Nicholas R Minor1, Mitchell D Ramuta2, Miranda R Stauss1
1Wisconsin National Primate Research Center, Madison, WI USA.
medRxiv : the preprint server for health sciences
|July 3, 2023
概括
空气样本的病原体不可知深度测序可以检测到广泛的人类病毒,改善了超出目标测试范围的公共卫生监测. 这种方法提高了我们对循环病毒组的理解,以便更好地准备疫情爆发.
科学领域:
- 环境科学环境科学
- 病毒学 病毒学
- 基因组学就是基因组学.
背景情况:
- 传统的病毒监测依赖于病原体特异性测试和个体行为,限制了全面的监测.
- 环境监测,就像废水和空气采样一样,提供了人口层面的洞察力,但往往错过了各种病毒威胁.
- 目前的方法提供了不完整的病毒组图像,阻碍了准确的风险评估和准备.
结论:
- 空气样本的深度测序为病毒监测提供了一个强大的,公正的工具.
- 这种方法可以显著提高常规公共卫生监测和流行病准备工作.
- 扩大空气采样与病原体不可知测序揭示了更广泛的病毒循环的景观.
相关概念视频
Microbiota of the Respiratory Tract
The human respiratory tract, comprising the upper and lower segments, serves as a critical interface with the external environment. The upper respiratory tract (URT)—including the nostrils, sinuses, pharynx, and oropharynx—is heavily colonized by microbes, while the lower respiratory tract (LRT), composed of the larynx, trachea, bronchi, and lungs, was long thought to be sterile. However, recent molecular studies have revealed that the lungs are not devoid of microbes but act more like...
Human Virome
The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible only with...
Respiratory Syncytial Virus Disease
Human respiratory syncytial virus (RSV) is a widespread pathogen that primarily targets infants and young children but also poses a serious health risk to elderly and immunocompromised individuals. Belonging to the Pneumoviridae family, RSV is a negative-sense, single-stranded RNA virus within the Pneumovirus genus. Its global health burden is significant, with millions of cases annually resulting in hospitalizations and mortality, particularly in resource-limited settings. Although most...


