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相关概念视频

Sanger Sequencing01:57

Sanger Sequencing

755.1K
DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
755.1K
Next-generation Sequencing03:00

Next-generation Sequencing

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The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
91.6K
Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

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In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
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RNA-seq03:21

RNA-seq

10.1K
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases. 
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
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Base-pairing and DNA Repair02:27

Base-pairing and DNA Repair

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DNA Damage can Stall the Cell Cycle02:37

DNA Damage can Stall the Cell Cycle

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In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
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相关实验视频

Updated: Jul 24, 2025

Using Next Generation Sequencing to Identify Mutations Associated with Repair of a CAS9-induced Double Strand Break Near the CD4 Promoter
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Using Next Generation Sequencing to Identify Mutations Associated with Repair of a CAS9-induced Double Strand Break Near the CD4 Promoter

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在单核酸分辨率下对氧化DNA损伤进行测序,使用click-code-seq v2.0

Songjun Xiao1, Aaron M Fleming1, Cynthia J Burrows1

  • 1Department of Chemistry, University of Utah, 315 S. 1400 East, Salt Lake City, UT 84112-0850, USA. burrows@chem.utah.edu.

Chemical communications (Cambridge, England)
|July 4, 2023
PubMed
概括

研究人员改进了一种DNA测序方法,以检测多种类型的氧化损伤. 这一进步有助于理解由DNA损伤引起的细胞结果.

科学领域:

  • 分子生物学分子生物学
  • 遗传学 是一个遗传学.
  • 生物化学 生物化学

背景情况:

  • 对DNA核酸的氧化损伤可以导致各种细胞后果.
  • 目前的测序方法可能无法有效检测各种类型的DNA损伤.
  • 了解DNA损伤对于细胞健康和疾病研究至关重要.

研究的目的:

  • 重新开发用于测序多种DNA损伤类型的点击代码-seq方法.
  • 增强测序技术的能力,以便更广泛地分析DNA损伤.

主要方法:

  • 修改之前报告的点击-代码-seq协议.
  • 实施简单的协议更改,以实现多损坏类型测序.

主要成果:

  • 重新开发的方法,click-code-seq v2.0,成功实现了多种DNA损伤类型的测序.
  • 协议修改允许在DNA损伤研究中得到更广泛的应用.

结论:

  • 增强的click-code-seq v2.0方法为研究各种氧化DNA损伤提供了一个多功能工具.
  • 这一进步有助于更深入地了解细胞对DNA损伤的反应.

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Using Next Generation Sequencing to Identify Mutations Associated with Repair of a CAS9-induced Double Strand Break Near the CD4 Promoter
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