与m6A相关的lncRNAs预测胃癌的预后并指示胃癌细胞周期
Dong Wan1, Lingnan He1, Cheng Guo1
1Endoscopy Center, Shanghai East Hospital, Tongji University School of Medicine, Shanghai, China.
Frontiers in genetics
|July 6, 2023
概括
这项研究确定了11个与N6-甲基氨酸 (m6A) 相关的长非编码RNA (lncRNAs) 作为胃癌的预后特征. 这种m6A-lncRNA模型预测了患者的存活率,并与细胞周期调节有关.
科学领域:
- 在瘤学瘤学.
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 分子生物学分子生物学
背景情况:
- 在胃癌的发展中,N6-甲基氨酸 (m6A) RNA 修饰至关重要.
- m6A修饰调节涉及胃癌发生的长非编码RNA (lncRNAs).
研究的目的:
- 在胃癌 (STAD) 中识别m6A相关 lncRNAs的预后特征.
- 开发胃癌预后的预测模型,并了解其与细胞周期的关联.
主要方法:
- 生物信息学和机器学习从TCGA数据库中确定了697个m6A相关的lncRNA.
- 拉索-考克斯回归构建了一个11-lncRNA预后模型;进行了ceRNA网络和功能丰富分析.
- qRT-PCR和流细胞计验证了AL391152.1在细胞周期调节中的作用.
主要成果:
- 18个lncRNA显示出预后价值;一个11-lncRNA模型准确地预测了胃癌患者的预后.
- 该模型作为生存率的独立风险因素.
- 该模型与细胞周期调节有关;AL391152.1下调节减少了环林的表达.
结论:
- 一个m6A相关的lncRNA预后模型成功地建立了胃癌.
- 这种模型可以预测患者的预后,并且与胃癌中的细胞周期进展有关.
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