RNA聚合酶II CTD对于转录是不可或缺的,并且需要在人类细胞中终止
Yousra Yahia1, Alexia Pigeot1, Amal Zine El Aabidine1
1Institut de Génétique Moléculaire de Montpellier (IGMM), CNRS-UMR5535, Montpellier, France.
EMBO reports
|July 10, 2023
概括
RNA聚合酶II的C端域 (CTD) 的最大子单元在很大程度上是转录不可用的. 一种截断的CTD (CTD-Δ5突变) 损害了基因终结,影响了RNA处理和转录因子相互作用.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 生物化学 生物化学
背景情况:
- RNA聚合酶II (Pol II) 的C端域 (CTD) 对于转录至关重要.
- 它由保存的七重复组成,对于转录调节和RNA处理至关重要.
研究的目的:
- 为了研究具有显著CTD截断的人类CTD-Δ5突变的转录表型.
- 确定CTD在活细胞中基因转录和终结中的作用.
主要方法:
- 在表达CTD-Δ5突变的人类细胞中分析转录表现型.
- 评估与调解器和整合器复合物的相互作用.
- 检查长距离相互作用和CTCF绑定模式.
主要成果:
- CTD-Δ5突变可以转录基因,但表现出受损终止,比其他CTD突变更严重.
- 突变者与中介体和整合体复合体没有相互作用.
- 在CTD-Δ5突变细胞中没有观察到TAD域或边界的变化.
结论:
- 对于活细胞中转录本身的行为,CTD在很大程度上是不可或缺的.
- 由于DNA上的Pol II动态变化,CTD耗尽导致终结受损.
- 一个模型表明,Pol II的进入减少了,但在接触时扩散性增加了,导致终止缺陷.
更多相关视频
10:59Artificial RNA Polymerase II Elongation Complexes for Dissecting Co-transcriptional RNA Processing Events
Published on: May 13, 2019
9.8K
10:49A Murine Cell Line Based Model of Chronic CDK9 Inhibition to Study Widespread Non-Genetic Transcriptional Elongation Defects TEdeff in Cancers
Published on: September 26, 2019
5.7K
相关概念视频
Eukaryotic RNA Polymerases
24.3K
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
24.3K
Transcription Initiation
16.5K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.5K
Transcription in Prokaryotes
96
Transcription is a highly regulated process that converts genetic information into RNA molecules. The transcription cycle is divided into three key stages: initiation, elongation, and termination, each driven by specific molecular mechanisms.Initiation of TranscriptionIn bacteria, transcription begins when the RNA polymerase core enzyme associates with a sigma factor to form a holoenzyme. For example, the E. coli sigma factor called σ70 forms a holoenzyme, which recognizes the -10 (Pribnow...
96
RNA Polymerase II Accessory Proteins
9.3K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.3K
Transcription Attenuation in Prokaryotes
15.5K
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
15.5K
Bacterial Transcription
28.6K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
28.6K
