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相关概念视频

Incomplete Dominance01:43

Incomplete Dominance

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Gregor Mendel's work (1822 - 1884) was primarily focused on pea plants. Through his initial experiments, he determined that every gene in a diploid cell has two variants called alleles inherited from each parent. He suggested that amongst these two alleles, one allele is dominant in character and the other recessive. The combination of alleles determines the phenotype of a gene in an organism.
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Pedigree Analysis01:35

Pedigree Analysis

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Overview
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Pleiotropy01:33

Pleiotropy

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Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...
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Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
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Genetic Variation01:25

Genetic Variation

328
Genetic variation is the diversity in DNA sequences found among individuals of the same species. This diversity is crucial for a species' survival because it helps organisms adapt to environmental changes. Genetic variation begins with fertilization, where an egg and sperm cell merge. Each of these cells carries 23 chromosomes, up to 46 in the fertilized egg. Chromosomes are long DNA strands that contain genes, the basic units of heredity.
Genes exist in different versions called alleles,...
328
Genetic Lingo01:11

Genetic Lingo

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相关实验视频

Updated: Jul 23, 2025

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information
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Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

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深度结构化学习用于孟德尔病的变体优先级.

Matt C Danzi1, Maike F Dohrn1,2, Sarah Fazal1

  • 1Dr. John T. Macdonald Foundation Department of Human Genetics and John P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, USA.

Nature communications
|July 13, 2023
PubMed
概括

新的人工智能工具MAVERICK准确地预测了孟德尔病的病原性变体. 它有助于诊断患者和发现新型疾病基因,显著推进遗传研究.

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Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
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In Vivo Functional Study of Disease-associated Rare Human Variants Using Drosophila
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相关实验视频

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Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
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科学领域:

  • 遗传学 是一个遗传学.
  • 生物信息学是一种生物信息学.
  • 计算生物学 计算生物学

背景情况:

  • 自动化变种评估对于诊断单基性疾病至关重要.
  • 在已知和新型基因中识别致病变体加速了研究.

研究的目的:

  • 介绍MAVERICK (孟德尔对变量效应的方法,在Keras中构建的变量效应).
  • 开发一个人工智能工具来分类变体和评估孟德尔病的病原性.

主要方法:

  • MAVERICK使用了一组基于变压器的神经网络.
  • 它对单核酸变异 (SNVs) 和主导或衰退遗传的indels进行分类.

主要成果:

  • 马维里克 (MAVERICK) 的性能优于现有的病原性预测工具.
  • 它将644个已解决的孟德尔病病例中的95%以上的病因变体排在前五名.
  • 它确定了新的疾病基因,包括一种运动神经元疾病.

结论:

  • 马维里克 (MAVERICK) 在孟德尔病的自动因果变异识别方面取得了重大进展.
  • 该工具有助于临床诊断和遗传研究的发现.