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相关概念视频

Viral Mutations00:36

Viral Mutations

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A mutation is a change in the sequence of bases of DNA or RNA in a genome. Some mutations occur during replication of the genome due to errors made by the polymerase enzymes that replicate DNA or RNA. Unlike DNA polymerase, RNA polymerase is prone to errors because it is not capable of “proofreading” its work. Viruses with RNA-based genomes, like HIV, therefore accrue mutations faster than viruses with DNA-based genomes. Because mutation and recombination provide the raw material...
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Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

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The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
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Synteny and Evolution02:31

Synteny and Evolution

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John H. Renwick first coined the term “synteny” in 1971, which refers to the genes present on the same chromosomes, even if they are not genetically linked. The species with common ancestry tend to show conserved syntenic regions. Therefore, the concept of synteny is nowadays used to describe the evolutionary relationship between species.
Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral...
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Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

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A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
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Mutation, Gene Flow, and Genetic Drift01:09

Mutation, Gene Flow, and Genetic Drift

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In a population that is not at Hardy-Weinberg equilibrium, the frequency of alleles changes over time. Therefore, any deviations from the five conditions of Hardy-Weinberg equilibrium can alter the genetic variation of a given population. Conditions that change the genetic variability of a population include mutations, natural selection, non-random mating, gene flow, and genetic drift (small population size).
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Leaky Scanning02:28

Leaky Scanning

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During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
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相关实验视频

Updated: Jul 22, 2025

Validating Whole Genome Nanopore Sequencing, using Usutu Virus as an Example
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Validating Whole Genome Nanopore Sequencing, using Usutu Virus as an Example

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人类起源的麻疹病毒在子中使用的非适应性进化.

Xu Guo1, Junwei Zou1, Kankan Yang2

  • 1College of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, PR China.

Comparative immunology, microbiology and infectious diseases
|July 24, 2023
PubMed
概括

病毒 (Mpox) 演变表明Clade-IIb-B经历了非适应性变化,与Clade-I.相比减少了宿主适应性. 的使用变化可能会影响Mpox的毒性和宿主基因表达.

关键词:
科登的适应指数科登使用 科登使用进化 进化 进化 进化 进化 进化 进化麻疹病毒的病毒.不适应性的非适应性相对代码子去优化指数的相对代码子.病毒性 病毒性

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科学领域:

  • 病毒学 病毒学
  • 基因组学就是基因组学.
  • 进化生物学 进化生物学

背景情况:

  • 麻疹病毒 (Mpox) 是一种引起人类和动物健康严重关切的动物性病原体.
  • 2022年全球疫情凸显了了解Mpox进化和宿主适应的必要性.

研究的目的:

  • 分析Mpox Clade-I和Clade-IIb-B.之间的代使用差异.
  • 研究推动Mpox.宿主适应的进化机制.

主要方法:

  • 在Clade-I和Clade-IIb-B之间对Mpox基因组编码子使用的比较分析.
  • 在个体基因中识别适应性和非适应性突变.
  • 评估对宿主基因 (上调和下调) 的密码体使用相似性.

主要成果:

  • 与Clade-I.相比,Mpox Clade-IIb-B表现出非适应性进化,表明宿主适应性降低.
  • 48个基因显示非适应性突变,而38个显示适应性突变.
  • 感染后的Mpox编码子使用与下调宿主基因相关,这表明对宿主基因表达有影响.

结论:

  • 非适应性码使用变化可能会导致Mpox毒性变化.
  • 了解这些进化模式,可以了解Mpox的致病性和宿主适应性.
  • 这项研究揭示了影响Mpox与宿主相互作用的潜在机制.