使用马尔科夫随机场模型快速重建扫描传输电子显微镜图像
Taichi Kusumi1, Shun Katakami1, Ryo Ishikawa2
1Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha 5-1-5, Chiba 277-8561, Kashiwa, Japan.
Ultramicroscopy
|July 27, 2023
概括
我们开发了一种用于扫描传输电子显微镜 (STEM) 的快速图像重建方法,使用马科夫随机场和贝叶斯推理. 这种技术显著加快了图像处理速度,并提高了多张图像的重建质量.
科学领域:
- 显微镜的使用方法
- 图像处理 图像处理
- 计算科学 计算科学
背景情况:
- 扫描传输电子显微镜 (STEM) 对材料科学至关重要.
- 在STEM中图像重建可能是计算密集型,限制实时应用.
- 多个图像的平均值可以减少噪音,但也可能使细节模糊.
研究的目的:
- 开发一种计算效率高的方法来重建STEM图像.
- 与传统方法相比,提高重建的STEM图像的质量.
- 证明拟议方法在各种图像大小的有效性.
主要方法:
- 使用马尔科夫随机场模型进行图像表示.
- 应用贝叶斯推理用于图像重建.
- 实现了重建512 × 512和264 × 240像素尺寸图像的方法.
主要成果:
- 在512×512图像中实现的重建时间低于200毫秒,在264×240图像中低于100毫秒.
- 与使用平均图像相比,使用多个非平均图像展示了优异的重建性能.
- 该方法有效地重建了详细的结构信息.
结论:
- 提出的快速重建方法显著提高了STEM成像效率.
- 用马尔科夫随机场的贝叶斯推理为高质量的STEM图像重建提供了一个强大的方法.
- 从多个非平均图像的重建提供了比平均图像更好的结果.
相关概念视频
Electron Microscope Tomography and Single-particle Reconstruction
2.4K
Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
2.4K
Scanning Electron Microscopy
4.3K
A scanning electron microscope (SEM) is used to study the surface features of a sample by using an electron beam that scans the sample surface in a two-dimensional manner. Typically, areas between ~1 centimeter to 5 micrometers in width can be imaged. SEM can be used to image bacteria, viruses, tissues as well as larger samples like insects. Conventional SEM gives a magnification ranging from 20X to 30,000X and spatial resolution of 50 to 100 nanometers.
Fundamental Principles
Accelerated...
Fundamental Principles
Accelerated...
4.3K
Super-resolution Fluorescence Microscopy
7.1K
Super-resolution fluorescence microscopy (SRFM) provides a better resolution than conventional fluorescence microscopy by reducing the point spread function (PSF). PSF is the light intensity distribution from a point that causes it to appear blurred. Due to PSF, each fluorescing point appears bigger than its actual size, and it is the PSF interference of nearby fluorophores that causes the blurred image. Various approaches to achieving higher resolution through SRFM have recently been...
7.1K
Transmission Electron Microscopy
5.6K
In 1931, physicist Ernst Ruska—building on the idea that magnetic fields can direct an electron beam just as lenses can direct a beam of light in an optical microscope—developed the first prototype of the electron microscope. This development led to the development of the field of electron microscopy. In the transmission electron microscope (TEM), electrons are produced by a hot tungsten element and accelerated by a potential difference in an electron gun, which gives them up to 400...
5.6K
Overview of Microscopy Techniques
10.5K
The early pioneers of microscopy opened a window into the invisible world of microorganisms. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes that leveraged nonvisible light, such as fluorescence microscopy that uses an ultraviolet light source and electron microscopy that uses short-wavelength electron beams. These advances significantly improved magnification, image resolution, and contrast. By comparison, the...
10.5K


