内源性Caulimovirids:化石,尸,以及生活在植物基因组中的生物
Héléna Vassilieff1, Andrew D W Geering2, Nathalie Choisne1
1INRAE, URGI, Université Paris-Saclay, 78026 Versailles, France.
Biomolecules
|July 29, 2023
概括
内源性calimovirids (ECVs),古代植物病毒感染的遗留物,在植物基因组中广泛存在. 研究揭示了它们多样化的生态作用和进化历史,为植物病毒相互作用提供了洞察力.
科学领域:
- 植物病毒学 植物病毒学
- 基因组学就是基因组学.
- 进化生物学是进化的生物学.
背景情况:
- 科利莫病毒是感染植物的双链DNA病毒.
- 内源性caullimovirids (ECVs) 是植物生殖系基因组中发现的集成病毒DNA元素.
- 电子病毒源于古老的病毒整合事件,有时是数百万年前.
研究的目的:
- 审查25年来关于ECV的研究.
- 为了探索Caulimoviridae的多样性和宏观进化.
- 确定有关ECV的知识差距和未来研究方向.
主要方法:
- 对25年来ECV研究的文献综述.
- 分析现有的植物基因组序列数据.
- 使用新的基因组注释工具.
主要成果:
- 在整个进化历史上,Caulimoviridae 已经占据了不同的生态.
- 在一些植物基因组中,ECVs是丰富的,这表明了过去显著的病毒集成.
- 研究已经揭示了ECVs在植物生物学上的进化轨迹和影响.
结论:
- 电子病毒为植物病毒共同进化提供了一个独特的窗口.
- 增加基因组数据和注释工具将提高对ECV范围和影响的理解.
- 未来的研究应该专注于ECV在植物生物学和Caulimoviridae进化中的作用.
关键词:
它们属于Caulimoviridae.它们是中间体 (centromeres).它们是内源性病毒元素.古病毒学古病毒学.帕拉雷特病毒 (pararetrovirus) 是一种病毒.植物基因组 植物基因组重复的元素是重复的元素.更多相关视频
07:16Immunofluorescent Labeling of Plant Virus and Insect Vector Proteins in Hemipteran Guts
Published on: May 14, 2021
1.7K
11:12Protocols for Investigating the Host-tissue Distribution, Transmission-mode, and Effect on the Host Fitness of a Densovirus in the Cotton Bollworm
Published on: April 12, 2017
8.6K
相关概念视频
Viruses of Archaea
31
Archaeal viruses play a crucial role in the ecosystems of extremophilic archaea, particularly those belonging to the phyla Euryarchaeota and Crenarchaeota. By shaping host evolution and facilitating gene transfer, these viruses influence microbial communities and contribute to genetic diversity in extreme environments. The archaea they infect thrive in acidic hot springs and hydrothermal vents characterized by high temperatures and low pH. Archaeal viruses exhibit remarkable structural...
31
Retrovirus Life Cycles
46.2K
Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the...
46.2K
Introduction to Plant Diversity
45.0K
From Water to Land
45.0K
Viruses with RNA Genomes
56
RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...
56
Subviral Agents
42
Subviral agents are infectious entities that resemble viruses but lack one or more viral components, such as a capsid or essential replication machinery. These agents include viroids, prions, and satellites, each possessing distinct structural and functional characteristics that influence their mode of infection and replication.Viroids are the simplest subviral agents, consisting of circular, single-stranded RNA molecules without a protein coat. They exclusively infect plants, relying entirely...
42
The Fossil Record
25.3K
The fossil record documents only a small fraction of all organisms that have ever inhabited Earth. Fossilization is a rare process, and most organisms never become fossils. Moreover, the fossil record only exhibits fossils that have been discovered. Nevertheless, sedimentary rock fossils of long-lived, abundant, hard-bodied organisms dominate the fossil record. These fossils offer valuable information, such as an organism's physical form, behavior, and age. Studying the fossil record helps...
25.3K
